Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00071 ATGTGTCTATCACAGAATCCCTTGATTGAGAGAAGCATGAGGAGAAGAAGAGACGACCTCAGCGTAGGCTCCCAGAAGGGTTGTTGCTCTCGTCTGCTCTGCCATAAGACTCATGATTCACGAAAGCCTCATAAATGTTCCTCTCTCTTCACCGATCTTTGTCATAAACTAGATTTGTCATCTCTGTTTCGCCAACCCAGCAATTCGCAGTTTAACGGAGTCTTCTTCATTCTTCTTCCTCCTCCTCCTCTTCTTCTTCAGAAAGAAACCATACCCACAGACGATTCCAGAGTTCTGGTGAATAATCTATTAAGCCAGCAGGGTTGTGTAGGTAAAAGATATGAGGTGTTCTTGAGTTGTCAGTGTAGCAATGGCACTCGTGAAGGGAATTTTCTTTCCGATCTCTATTCATCTCTGAAGGAAGCTGGAATTTCCGTACTCAAAGATGACATCTCAAGTGAGCTATTGCATAGCCCTACTGAAGGTTCTGAAATTTCAATCATCGTCTTCTCTAAACAATATCTTAGGAATGAAAGTACGTTTATTCAAAATATTATAGAGCGTGTTCGTCAGATATTGGATGGGAAAGATTCCAAAGATGGCCTAGTTGGATGGAAGTCACAAGTGCAAGAAGTGATTAAAATGCTTCAAAAGCATCAATCAAAAAATGCTCTCTGGATAGGGATATGGGGAATGGGAGGTGTGGGCAAAACAACTATTGCCAGACTCATTTTTGAGCACATTCAGTACGAATTCGAGCGTGCATGTTTTCTTTCAAATGTCAGGGAAGCCTGGGAGACGGGAGGCCCATATGGTTTAATAAGAGAACTTGTTTTGGCAATGCGTGACCGAACAGATCTAATGGTAGATGAGGTGGACGAAAAACAGAGCCTGGGAAGAGCTTCCGATCATAAGGTACTTCTTGTGGTTGATGATGTGAATGACGTGCAGCAGCTACGTTCTTTATGTGGAAATGTTCATGGTCAAGGGAGCATAATAATCATTACCACAAGAGATTCACATATATTTCAAGCTTTTCATCGAGTGGACTATGTGTATAGCGTAAAACATTTGAGCGATCATGAGTCTCTTGAACTTCTCAGTAGAACAGCATTTAATCAAGCAAGTCTTGAAGCAGAATTCATCGAACTTGGCAGAAGATTGGTGGCTTATACTGAGGGGCTACCACTAGCTCTTAAGGTCGTTGGCTCTATTATGAATGGACGGTCACCGATAGAATGGGAGTCAGCATTGATAAAACTAAGCACAGATCTCCCTCGTGATATATACAACACACTAGAGCTTAGCTTTTACTCTTTAGATGATGATGAGAAAGAAATATTTCTCAATATAGTTTTATTTTACATTGGGGAGGACAGGGATGCTGTGATCCAGAAGTTGGATGGCCGTGGATTTAGTGCTAGCATCGGGATAAGAGCCCTGGTGAATCGAAGCCTTGTAACAATTGATCACAACAACAAACTTAGAGTGCATAATCTGTTGCAGCTCATGGGAAGGCAAATAACACGTGAAACTTCACAAAATGTCATTCTAAATAAAGGTCATAGGTATGAAGTGTTTTTAAGTTTCAGAGGTGACGACACTCGAGCGACTTTTACTTCACATCTTTATACAGCTCTATGTAATGCTGGCATTACTGTTTTCAAAGATGATGTTGAGCTTCCTAGAGGAAATCGTATCGACAGAGAACTATTACAGGCAATTGGAAGTTCAAAAATTGCAATCATTGTCTTCTCTCGAGAATACGCTGCATCTAAATGGTGTTTGGAGGAATTGTCAATAATCATGGAGCTTCATAAATCAAATTGTCAAGTGGTTCTACCTGTGTTTTATGACGTAGATCCATCAGAAATTCGTAACCAAACTTCTAGTTTCGGAAAAGCATTTAAAGATCTTATAAATAGAATTTCACCACTAGAACATCAAGTTTCCAAGTGGAGAACAGCCCTTGTTGAGGCTGGAGGCATTGCAGGGATTGTTGTGCTTGGTTCAAGGGATGAAAGTGAAAATGTGAAAACTATCATTGAGAATGTTTGTGATATATTGGACAAGAAAGATTTGTTTGTCGCTGAGCACCCAGTAGGAGTGGATAATCGCATGCAAGAAGTGATCAAAATGCTCCAAAACCATCCATCTGAAGATGTTATTATGATAGGGATATGGGGAATGGGGGGTACAGGCAAAACAACTATTGCCAAAGCCATTTACAATGAAATTGGTTGCACATTTGAGAGTAGAAGTTACCTTTCAAAGATCAGAGAAGTTTGGAATCAAGGAAAAAAGAACCAAGTGAACTTACAAAACCAACTTCTTTCTGAAATATGTATGACAACAAAAATAAAGATAAATAGCATTGAATCAGGAATAATCACATTAAGGGATAGACTTCACCATAAAAAGGTACTGGTTGTGCTTGATGACGTGGATGAGTTAGTCCAACTAAATGCTTTAGTTGGAAGCCGTGCCTGGTTTAAACCTGGAAGTATAATAATCATCACCACTAGAAATCAACGCCTACTCCTTCAAGTGAACTGTGGTGTTTATCTAATGAAGAATTTGGATGACAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTTAAACAAGAAAGTCCTAAAAAAGATTTCATTAAACTTTCAAGAGATATAGTTGCATACTCTGGGGGACTTCCATTAGCTCTTGAAGTCATTGGTTCCTATTTATTCGATAGAGATGTTGAGGAATGGAAGATTGTATTGGAGAAACTTAAAAAAATTCCCAATGACAAGATACAAAAGAAGCTTAAAATAAGTTTTGATGGTTTAAGTGATGATTTGGAGAAAGAAATATTCCTTGATATATCTTGCTTCTTTATTGGAATGGACAAAAATGAAGTGACACAGATATTAAATGGCTGTGAATTGTTTGCTGACATCGGAATCAAAACCCTTATTGAGCGAAGCCTTGTATCCATTGATGAGAAAAACAAACTTGTTATGCATGATTTGTTGAGGGACATGGGAAGAGAAATAATTCGTAAACAATCTCAAAAGGAGCTTGGGAGGAGAAGTAGGTTGTGGTTTCAAGAGGATACACTTGCTGTATTATTCGAACACATGGGAACAGAGGCTATAGAAGGACTGTCTTTGACATTGTCACAAAGTGAAAAAATGCATTTTCAGACGGAAGCATTTAGGATGATCAACAAACTCAGATTGCTTCATCTTGAAAATGTACAACTAAGGGGAGGCTACAAATACATAAGTAGAAATCTGAGATGGCTCTGCTGGCATGGTTTTCCCACAAAATACATTCCTAGCAACTTTTATCAACAGAATTTAGTTGCTATTGACTTAAAATACAGTAACCTCACACAAGTGTGGAAGGAACCCCAGCTTCTAAAGACACTGAAAATCCTCAATCTCAGCCACTCTCATTACTTGGTGCAAACTCCTGATTTCTCAAAACTTCCAAATCTTGAAAAGTTGATCCTCAAAGATTGTCCAAGTTTATTCATGATACATCACTCTATTGGGCTCCTTCATAGACTTCTTTTACTAGACTTGGAGGATTGTATTGGCCTTCATAGTCTCCCAAGAAGTATTTACAGATTGAAATGCCTAAGAACTCTCATTCTTTCTGGTTGTAAGAATATTGAAAAGCTAGAGGAGGACATAGAGCAAATGGAATCTTTGACAACTCTAATTGCTCCTGCAATAAAACAAGTGCCCTTTTCTATAGTGAGACTAAAGAGCGTTTTGTATCTATCTATTTGTGGTCATGAAGGATTATCACATCATGTGATTCCTTCTCTTTACCAGTCTTGGATGTCCCCAACAAAAAATCCACTACCTCTTATTCCAACACATGTGGGCATGCCATCATCAATTTTGTTGAATATGCTAAACACAAAGTCCTTTGTTGGACGATGGATTGGAGATTCTTGA 3948 0.387 MCLSQNPLIERSMRRRRDDLSVGSQKGCCSRLLCHKTHDSRKPHKCSSLFTDLCHKLDLSSLFRQPSNSQFNGVFFILLPPPPLLLQKETIPTDDSRVLVNNLLSQQGCVGKRYEVFLSCQCSNGTREGNFLSDLYSSLKEAGISVLKDDISSELLHSPTEGSEISIIVFSKQYLRNESTFIQNIIERVRQILDGKDSKDGLVGWKSQVQEVIKMLQKHQSKNALWIGIWGMGGVGKTTIARLIFEHIQYEFERACFLSNVREAWETGGPYGLIRELVLAMRDRTDLMVDEVDEKQSLGRASDHKVLLVVDDVNDVQQLRSLCGNVHGQGSIIIITTRDSHIFQAFHRVDYVYSVKHLSDHESLELLSRTAFNQASLEAEFIELGRRLVAYTEGLPLALKVVGSIMNGRSPIEWESALIKLSTDLPRDIYNTLELSFYSLDDDEKEIFLNIVLFYIGEDRDAVIQKLDGRGFSASIGIRALVNRSLVTIDHNNKLRVHNLLQLMGRQITRETSQNVILNKGHRYEVFLSFRGDDTRATFTSHLYTALCNAGITVFKDDVELPRGNRIDRELLQAIGSSKIAIIVFSREYAASKWCLEELSIIMELHKSNCQVVLPVFYDVDPSEIRNQTSSFGKAFKDLINRISPLEHQVSKWRTALVEAGGIAGIVVLGSRDESENVKTIIENVCDILDKKDLFVAEHPVGVDNRMQEVIKMLQNHPSEDVIMIGIWGMGGTGKTTIAKAIYNEIGCTFESRSYLSKIREVWNQGKKNQVNLQNQLLSEICMTTKIKINSIESGIITLRDRLHHKKVLVVLDDVDELVQLNALVGSRAWFKPGSIIIITTRNQRLLLQVNCGVYLMKNLDDSESIELFSWHAFKQESPKKDFIKLSRDIVAYSGGLPLALEVIGSYLFDRDVEEWKIVLEKLKKIPNDKIQKKLKISFDGLSDDLEKEIFLDISCFFIGMDKNEVTQILNGCELFADIGIKTLIERSLVSIDEKNKLVMHDLLRDMGREIIRKQSQKELGRRSRLWFQEDTLAVLFEHMGTEAIEGLSLTLSQSEKMHFQTEAFRMINKLRLLHLENVQLRGGYKYISRNLRWLCWHGFPTKYIPSNFYQQNLVAIDLKYSNLTQVWKEPQLLKTLKILNLSHSHYLVQTPDFSKLPNLEKLILKDCPSLFMIHHSIGLLHRLLLLDLEDCIGLHSLPRSIYRLKCLRTLILSGCKNIEKLEEDIEQMESLTTLIAPAIKQVPFSIVRLKSVLYLSICGHEGLSHHVIPSLYQSWMSPTKNPLPLIPTHVGMPSSILLNMLNTKSFVGRWIGDS 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00071 1315 Pfam NB-ARC domain 705 931 IPR002182 GO:0043531
Pral4093g00071 1315 Pfam NB-ARC domain 207 423 IPR002182 GO:0043531
Pral4093g00071 1315 Gene3D - 200 352 IPR027417 -
Pral4093g00071 1315 SUPERFAMILY Toll/Interleukin receptor TIR domain 110 180 IPR035897 -
Pral4093g00071 1315 Pfam TIR domain 524 685 IPR000157 GO:0007165
Pral4093g00071 1315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 694 954 IPR027417 -
Pral4093g00071 1315 Gene3D - 859 943 IPR042197 -
Pral4093g00071 1315 Gene3D - 357 441 IPR042197 -
Pral4093g00071 1315 SUPERFAMILY L domain-like 1050 1275 - -
Pral4093g00071 1315 PRINTS Disease resistance protein signature 724 739 - -
Pral4093g00071 1315 PRINTS Disease resistance protein signature 1132 1148 - -
Pral4093g00071 1315 PRINTS Disease resistance protein signature 894 908 - -
Pral4093g00071 1315 PRINTS Disease resistance protein signature 802 816 - -
Pral4093g00071 1315 Gene3D Ribonuclease Inhibitor 1043 1245 IPR032675 -
Pral4093g00071 1315 SUPERFAMILY "Winged helix" DNA-binding domain 428 513 IPR036390 -
Pral4093g00071 1315 Gene3D - 694 854 IPR027417 -
Pral4093g00071 1315 ProSiteProfiles TIR domain profile. 522 689 IPR000157 GO:0007165
Pral4093g00071 1315 SUPERFAMILY Toll/Interleukin receptor TIR domain 519 665 IPR035897 -
Pral4093g00071 1315 Gene3D - 519 693 IPR035897 -
Pral4093g00071 1315 Gene3D - 112 199 IPR035897 -
Pral4093g00071 1315 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 524 1260 IPR044974 GO:0006952
Pral4093g00071 1315 SUPERFAMILY "Winged helix" DNA-binding domain 929 1036 IPR036390 -
Pral4093g00071 1315 FunFam Disease resistance protein (TIR-NBS-LRR class) 520 691 - -
Pral4093g00071 1315 SMART till_3 523 663 IPR000157 GO:0007165
Pral4093g00071 1315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 450 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00071 Pral-Chr4093 1516396 1524741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00071 176 515 WRKY Transcription Factor Family AT4G12020 34.393 3.27e-39 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00071 - - pcin:129287786 1333.55