Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00065 ATGCTACTTCACGAAGGAACGTATATAAAAACAGAACTTTTGGAAGCAATTGGAAGTTCAAAAATTGCGATCATCATCTTCTCTGAGGAATATGGTGGATCTAAATGGTGTTTGGAGGAATTGTCAATGATCATAGAGCTTTATGAAACAAATAATAGGACAGTTCTACCTGTGTTTTACCATGTTAGTCCAACACAAATTCGTCATCAAACTTCTAGTTTTGGAGGAGCATTTAATGATCTTGTACAAAAGAATTCACCATCAAAATATCAAGTTTCGGAGTGGAGGAAAGCCCTTACTAATGTTGGGAATCTTAAAGGGACGGTTGTACATAGTTTTAGGGACGAGAGTGATTATATTGAAGACATTGTTAGGCAAGTTTGTGATATATTAGACAAGAAAGACTTATTTGTGGCTGAGCACCCAGTAGGATTAGATAATCGTGTACGTGAAGTGATCGCAATGCTCCAAAACCATTCATCTGAAGATACTGTCATGGTTGGGATATGGGGAATGGCGGGTGCCGGCAAAACAACTATTGCCAAAGCCATCTATAATGAAATTGGTCGCAATTTTGAGAGTAGAAGTTACCTCCCAAATATCAGAAAAGTTTGGCGTCAAAAAAATGGTAAAGAGCACTTGCAAAACAAACTTCTTTCTGAAATATGCAAGCCAACAAAAATGAAGATAAACAGCATCGAATCAGGAATGATCACTTTGAAGGATAGACTTAGACATAAAAAGGCGCTGGTTGTGCTTGATAATGTGGATAAGCTGGCCCAACTAAAAGCTCTAGCTGGAAGTGGTGACTGGTTTAAACCAGGAAGTATAATAATCATCACAACTAGAAATCAAAGTTTACTCCCTAAAAAGGATTGTTGCGTTTATATGATGAAGAATTTGGATAAAGGGGAATCTGTTGAGCTGTTTAACTGGCATGCATTTAAACAAGAAAGTCCCAAGGATGATTTCATTCACCTTTCAAGAGATATAGTTGTATACTGTGGGGGACTTCCATTCGCTCTTGAGCAAGATACACAAGAAGCTAAAAATAATCTATGA 1062 0.3738 MLLHEGTYIKTELLEAIGSSKIAIIIFSEEYGGSKWCLEELSMIIELYETNNRTVLPVFYHVSPTQIRHQTSSFGGAFNDLVQKNSPSKYQVSEWRKALTNVGNLKGTVVHSFRDESDYIEDIVRQVCDILDKKDLFVAEHPVGLDNRVREVIAMLQNHSSEDTVMVGIWGMAGAGKTTIAKAIYNEIGRNFESRSYLPNIRKVWRQKNGKEHLQNKLLSEICKPTKMKINSIESGMITLKDRLRHKKALVVLDNVDKLAQLKALAGSGDWFKPGSIIIITTRNQSLLPKKDCCVYMMKNLDKGESVELFNWHAFKQESPKDDFIHLSRDIVVYCGGLPFALEQDTQEAKNNL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00065 353 Gene3D - 300 344 IPR042197 -
Pral4093g00065 353 SMART till_3 2 105 IPR000157 GO:0007165
Pral4093g00065 353 Gene3D - 2 103 IPR035897 -
Pral4093g00065 353 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 343 IPR044974 GO:0006952
Pral4093g00065 353 Gene3D - 113 298 IPR027417 -
Pral4093g00065 353 Pfam TIR domain 5 130 IPR000157 GO:0007165
Pral4093g00065 353 ProSiteProfiles TIR domain profile. 1 131 IPR000157 GO:0007165
Pral4093g00065 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 344 IPR027417 -
Pral4093g00065 353 PRINTS Disease resistance protein signature 166 181 - -
Pral4093g00065 353 PRINTS Disease resistance protein signature 335 349 - -
Pral4093g00065 353 PRINTS Disease resistance protein signature 243 257 - -
Pral4093g00065 353 Pfam NB-ARC domain 147 343 IPR002182 GO:0043531
Pral4093g00065 353 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 107 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00065 Pral-Chr4093 1427795 1429971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00065 8 343 WRKY Transcription Factor Family AT4G12020 28.824 1.01e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00065 - - pcin:129287786 420.624