Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00064 ATGGCGGCCACTGGAGCTCTAACATCTAGCGGCGACCACCTGAGCAATAAATATCGAGTGTTCTTGAGCTTTAGTGGAGGCGAAGACACACAAGAATCTTTCCCTTCCCTTCTGTATTCATCTCTAAGGAAGGCTGGAATTTCTGTTCTCAAAGATGATATCTCAAGCGAACTATCTCAAAGCCCTATCAAAGCTTCTATAATTGTAATCATCATCTTCTCTCACCACTATGCTAGTTCCAGAAGGTGCCTCGACGAACTCACAAAAATCATGGAGTTTCGTAGATCATATCATCTGGTAGTTCTTCCCATATTCTATGGTGTGGATCCGTCTGATGTTTGTTATCAGGAATTTAGTTTTGGACAAGCATTTCAAGATCTCATACAAAAAATTTCACCTACCGAAGATGAATTGTCAAAGTGGAGGACAACTCTCAGTGAAGCTGGAGGCATTTGTGGGATTGTTGTGCCTAATTTCGAAGCCAGAGATGAGAGTGAAGAAGTGAAAGAAGTTGTTGAGAATGTTCTCGATATATTGGACAAGAAAGATTTGTTTGTTGCTGCACACCCTGTAGGAGTGGATGATCGTGTGCAAGAAATGATCACAATGTTCCAAAACCATCAATCTAAAGATGTTGTCATGGTAGGGATATGGGGAATGGGGGGTGTAGGCAAGACAACTATTGCCAAAGCCATTTATAATGAAATTGGTCGCACATTTGAGAGTAGGAGTTACCTTTCAAAGATCAGAAAAGCTTGGGATCAAGAAGAGGGTCAAGTGCGCTTACAGAACCAACTTCTTTCTGATATATGCAAGACAACAAAAGTGAAGATAAATAGCATTGAATCTGGAAAAATCACATTGAGGGATCGACTTCGCCATAAAAAGGCATTGGTTGTGCTTGATGATGTGGATAAGTTGGCTCAACTGAATGCTTTAGTGGGAAGTCGTGACTGGTTTGGTGAAGGGAGTACAATAATCATCACAACTAGAAATCGACGTTTGCTCGTTGAAATCGATTGTTGTGTTTATCTAATGAAAAATTTAAATGAAAGGGAATCTATGGAGCTTTTTAGTTGGCATGCATTTAAACAAGAAAGTCCTAAAAAAAACTTCACTGAATTTTCGAGAGATATAGTTGCATATTCTGGGGGACTTCCACTGGCTCTTCAAGTCCTTGGCTCTTATTTATTTGATAGAGAAGTGGAGGAATGGGAGAGTGTATTGGAGAAACTTAGAAAATTTCCCAATAACAAGATAACAAAGAAGCTAAAAGTAAGCTTTGATGGTTTAAGTGATCTGTTGGAGAAAGAAATATTTCTTGATATATCTTGCTTCTTTATTGGGATGGACAGAAATTATGTGACACAGATATTAAATGGTTGTGGATTTTTTGCTGACATTGGAATCAAAACCCTTGTGGAGCGAAGCCTTGTGACTATTGATAAAAAGAATAAACTTGGTATGCATGATTTGCTGCGGGACATGGGAAGAGAAATAATTCGTGAACAGTCTCGAAAGCTTGGGAAGAGAAGTAGGTTATGGTTTCGCAAAGATGCACGAGCTGTATTATTAAAACACATGGGAACGGTAGCTATTGAAGGACTGTCTTTGAAGCTGTCACAAAGTAAAAAAATGCATTTTCAGACAGAAGCTTTTACGAAGATGAAGAGACTCAGATTACTTCGTCTTGACAATGTAGAACTTAGAGGAGACTACAAATACATTAGTAGAGAACTCAGATGGCTTTGTTGGCGTGGGTTTCCCGTAAAATACATTCCTAGAAGCTTTTATCAAAAGAAGTTAGTTGCTATTGACTTAAAATACAGCAGCCTCATACAAGTTTGGAAGGAACCCCAGTTATTGAAGAAGCTGAAAATCCTCAATCTCAGCCACTCTCGTTGGTTGATGGAGACTCCTGATTTTTCAAAACTACCAAGTATTGAAAAGTTGATCCTTAAAGATTGTCCAAGTTTGACCACGATACATCATTCTATTGGGCTTCTTGATAAACTTCTTCTACTAAATTTGAAGGATTGTATTGGCCTTCGTAATCTCCCAAAAAGCATTTATGGATTAAGAAGCTTAAATACTTTGGTTCTTTCTGGTTGTATGAATATTGAAGAGCTTGGCGAGGACATAGAGCAAATGGATTCTTTGACAACTCTAATTGCTCCTACAATAAAACAAGTGCCTTTTGCTTTAACGAGATTAAAAAACATTCTGTATTTATCTGTTCATGGTCATGAAGGATTACCACATCATGTGATTCCTTCTCTCTTCCAGTCTTGGACATCCCCAGCAAATAACCCACTACCTCATATTCCAACATATGTGGGCATGCCATCATCAGTTTTGTGGGATATGCTAAACAGTATCTATGTTCCTTTCACAATCCCTAGCACTGAACCAAAGGGACAAAACTTGTTGTTGGAAGATGGATTGGATACTCCTGATTCCTTGTTCTTGGAATATCTTTTAATTCAAATTGGAAAGGATTCTCAAGTCTTTCATACACTTTCAAATTGTGTTTCACAGGGATTGAATCTTACAAAATATAGTGGTGATTGTATTCTCCCTAGTGACAATTACCCCCATTGGCTAACATTCTCGGGTGAAGGAGCTTCTGTAAAATTTGAAGTGCCTCCAGTTACTGGTCATAATCATTTAAAAGGGATGACTATTTGTTGTGTGTATATCCCCTCAGGTGATTGGGATATTAAGGCATGTGAATCTCGTATAATTTGCTTAATGATTATAAATTATACAAAGACAACCACTTTGCTCTTCACGGAAGACAAACTAAAATCCTTGGAAGAAGCAGAGATGAGAGAAATAATATCAAATCTAGAATCTGGTGACCAAGTAGAAGTGCAAGCAGCTTTTGGGAGTGGATTCACGGTAAAGAAAACAGCTGTCTACTTGCTATATGACGAGTCATTTGATGAAGTGATGGAGTCTTCAACACCTGAAGTTGTAAATTTAACTAGCACCAAACACAAATGTGAGGAGGAAGAGGCACATGAATCTATCAGACCTAGAAAGGCAATGAAGATTTGA 3060 0.383 MAATGALTSSGDHLSNKYRVFLSFSGGEDTQESFPSLLYSSLRKAGISVLKDDISSELSQSPIKASIIVIIIFSHHYASSRRCLDELTKIMEFRRSYHLVVLPIFYGVDPSDVCYQEFSFGQAFQDLIQKISPTEDELSKWRTTLSEAGGICGIVVPNFEARDESEEVKEVVENVLDILDKKDLFVAAHPVGVDDRVQEMITMFQNHQSKDVVMVGIWGMGGVGKTTIAKAIYNEIGRTFESRSYLSKIRKAWDQEEGQVRLQNQLLSDICKTTKVKINSIESGKITLRDRLRHKKALVVLDDVDKLAQLNALVGSRDWFGEGSTIIITTRNRRLLVEIDCCVYLMKNLNERESMELFSWHAFKQESPKKNFTEFSRDIVAYSGGLPLALQVLGSYLFDREVEEWESVLEKLRKFPNNKITKKLKVSFDGLSDLLEKEIFLDISCFFIGMDRNYVTQILNGCGFFADIGIKTLVERSLVTIDKKNKLGMHDLLRDMGREIIREQSRKLGKRSRLWFRKDARAVLLKHMGTVAIEGLSLKLSQSKKMHFQTEAFTKMKRLRLLRLDNVELRGDYKYISRELRWLCWRGFPVKYIPRSFYQKKLVAIDLKYSSLIQVWKEPQLLKKLKILNLSHSRWLMETPDFSKLPSIEKLILKDCPSLTTIHHSIGLLDKLLLLNLKDCIGLRNLPKSIYGLRSLNTLVLSGCMNIEELGEDIEQMDSLTTLIAPTIKQVPFALTRLKNILYLSVHGHEGLPHHVIPSLFQSWTSPANNPLPHIPTYVGMPSSVLWDMLNSIYVPFTIPSTEPKGQNLLLEDGLDTPDSLFLEYLLIQIGKDSQVFHTLSNCVSQGLNLTKYSGDCILPSDNYPHWLTFSGEGASVKFEVPPVTGHNHLKGMTICCVYIPSGDWDIKACESRIICLMIINYTKTTTLLFTEDKLKSLEEAEMREIISNLESGDQVEVQAAFGSGFTVKKTAVYLLYDESFDEVMESSTPEVVNLTSTKHKCEEEEAHESIRPRKAMKI 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00064 1019 Pfam TIR domain 17 175 IPR000157 GO:0007165
Pral4093g00064 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 443 IPR027417 -
Pral4093g00064 1019 Gene3D - 348 432 IPR042197 -
Pral4093g00064 1019 ProSiteProfiles TIR domain profile. 16 179 IPR000157 GO:0007165
Pral4093g00064 1019 SUPERFAMILY L domain-like 537 763 - -
Pral4093g00064 1019 Gene3D Ribonuclease Inhibitor 530 786 IPR032675 -
Pral4093g00064 1019 PRINTS Disease resistance protein signature 620 636 - -
Pral4093g00064 1019 PRINTS Disease resistance protein signature 291 305 - -
Pral4093g00064 1019 PRINTS Disease resistance protein signature 383 397 - -
Pral4093g00064 1019 PRINTS Disease resistance protein signature 214 229 - -
Pral4093g00064 1019 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 153 IPR035897 -
Pral4093g00064 1019 Pfam NB-ARC domain 195 424 IPR002182 GO:0043531
Pral4093g00064 1019 Gene3D - 13 186 IPR035897 -
Pral4093g00064 1019 Gene3D - 187 345 IPR027417 -
Pral4093g00064 1019 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 751 IPR044974 GO:0006952
Pral4093g00064 1019 SUPERFAMILY "Winged helix" DNA-binding domain 418 524 IPR036390 -
Pral4093g00064 1019 SMART till_3 17 151 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00064 Pral-Chr4093 1400396 1409970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00064 15 744 WRKY Transcription Factor Family AT4G12020 32.148 1.88e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00064 - - pcin:129288023 1161.36