Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00058 ATGCGATCTTCACTAGCAGAGCCAGAGATCGATGATGAACCAGAAAGCGCAAAAGACAATGAAGTCGTCGCCGGAAAAAAGAACAAAATGAAGAAGGCGAGGATGAAGTGGGGAAGAAGACGAAGCGGGAGATCCGTGGAGAGGATGAGTCGCCCTTCCATCTCAGTGCTCACCAACGGCAATGGATATGAAGTGTTCTTGAGTTTTAGTAGAGGCGAAGAGACTACAGAATCTTTCCCTTCTCGTCTCTATTCATATCTGAGGGAAAAGGGATGTTCTGTTTTCAAAGATGATATATCAATTGAACTATTGCAAAGTGTTCGATGTCGTAAAATTTTCGTTATCATTTTCTCTAAAGACTATGCTAGTTCTAGAATGTGCCTCGAGGAACTCACAAAAATCATGAAGTTTCGCAGCATGCCATATGATCATGTAGTTCTTCCCGTATTCTATGACGTGAGTCAGTGGGAAGTTTGTAATCAAGGCTCATTTCAAGGTCTCATACAAAAAGTTTCACACACTGAAGAGGAAGTTTCAAGGTGGAGGAGAGCTCTTCGTGAAGCTGCAAGGAACGTTGGTGGGATTGATGTGTCTGATTACCTCAAGCCCGGCTCTCCACATGATGTGGATGGTATTGAGCCTATTATTGGTCTTGTTCTTCATCAATTGAAGCCTTCGTATAAGATGTTCCCTGTTGGAGTGGATTCTCGTGCTCAGGATGTGATTACAATGCTTCGTAACCATAAATCAAAACATATTGTCTTCATAGGCATATGGGGAATGAGGGGTATAGGCAAAACAACTATTGCCAAAGCCATCTTTAACCACATTCAGTGCGCATTTGAGAGTATATGTTTTCTTCCAAATGTTAGGGAACAATCAGAGAGGAAAGTCGACCTTGTTTCAGTAATATGTAAAGCAACAGATATGAGAATAAATAGCACTGAATCAAGAACCCTCGACTTGAATGAAAGACCTTGCCAAAAGAAGGTACTTCTTGTGTTTGACGATGTGAATCAGTTGGAGCAACTAAATACTTTATGTGGAAGTTGTGAACAGTTTGGTGAAGGGAGTATAATCATCATTACAACGAGCAATTTATATCTACTTAATGCCTTTCAAGTGGATGATATATATTGCATGAAACTTTTGAGCGATGAAGAGTCTCTTCAACTTCTCAGTTGGCATGCATTTCAACAATCATACCCTAAAGGAGAATTCATCCATGCTTGCAAAGAATTGGTTGTTTATGCTGAGGGACTGCCCCTGGCTCTTACTACAAGCATTGACTCTATTTTGAATAAGGAGGAATTGGATCAACGGGAATCCATATTGTGGAATATGAATAGAGCTCTCCATCCTGTTATATACAACAAACTAAGGCTTAGCTTTGACTATTTAAATGCTGAAGAGAAAGAAATATTTCTAAATATAGTTTTATTCCATATTGGGAGGGACATGGATGATGTGATCCAAAAGCTGGATGCCCATGGAAGCAATGTTCATATTAGGATACGAGTCCTAGAGGATCGAGGACTTGTAACCATTGATAACAACAACAAACTCAGAATGCATAATCTATTGCAGCTCATGGGAAGGCAAATAATCCGTGAGACTTCACAAAGTGAGCTTGAAGGTAGGTTATGGTTTTCTAGGGATGCTTTATGTGCTTCATGTCTTATATCAACGTGCCTGTATCAATGA 1704 0.4008 MRSSLAEPEIDDEPESAKDNEVVAGKKNKMKKARMKWGRRRSGRSVERMSRPSISVLTNGNGYEVFLSFSRGEETTESFPSRLYSYLREKGCSVFKDDISIELLQSVRCRKIFVIIFSKDYASSRMCLEELTKIMKFRSMPYDHVVLPVFYDVSQWEVCNQGSFQGLIQKVSHTEEEVSRWRRALREAARNVGGIDVSDYLKPGSPHDVDGIEPIIGLVLHQLKPSYKMFPVGVDSRAQDVITMLRNHKSKHIVFIGIWGMRGIGKTTIAKAIFNHIQCAFESICFLPNVREQSERKVDLVSVICKATDMRINSTESRTLDLNERPCQKKVLLVFDDVNQLEQLNTLCGSCEQFGEGSIIIITTSNLYLLNAFQVDDIYCMKLLSDEESLQLLSWHAFQQSYPKGEFIHACKELVVYAEGLPLALTTSIDSILNKEELDQRESILWNMNRALHPVIYNKLRLSFDYLNAEEKEIFLNIVLFHIGRDMDDVIQKLDAHGSNVHIRIRVLEDRGLVTIDNNNKLRMHNLLQLMGRQIIRETSQSELEGRLWFSRDALCASCLISTCLYQ 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00058 567 Gene3D - 58 223 IPR035897 -
Pral4093g00058 567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 477 IPR027417 -
Pral4093g00058 567 Pfam NB-ARC domain 239 435 IPR002182 GO:0043531
Pral4093g00058 567 Coils Coil 171 191 - -
Pral4093g00058 567 SUPERFAMILY Toll/Interleukin receptor TIR domain 57 190 IPR035897 -
Pral4093g00058 567 Gene3D - 383 468 IPR042197 -
Pral4093g00058 567 MobiDBLite consensus disorder prediction 1 21 - -
Pral4093g00058 567 ProSiteProfiles TIR domain profile. 61 220 IPR000157 GO:0007165
Pral4093g00058 567 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 63 553 IPR044974 GO:0006952
Pral4093g00058 567 PRINTS Disease resistance protein signature 255 270 - -
Pral4093g00058 567 PRINTS Disease resistance protein signature 325 339 - -
Pral4093g00058 567 PRINTS Disease resistance protein signature 418 432 - -
Pral4093g00058 567 SUPERFAMILY "Winged helix" DNA-binding domain 456 554 IPR036390 -
Pral4093g00058 567 SMART till_3 62 191 IPR000157 GO:0007165
Pral4093g00058 567 Pfam TIR domain 63 190 IPR000157 GO:0007165
Pral4093g00058 567 Gene3D - 224 377 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00058 Pral-Chr4093 1171248 1177740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00058 232 549 WRKY Transcription Factor Family AT5G45050 33.437 1.59e-43 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00058 - - pcin:129287786 393.275