Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00055 ATGCGCTTGCCGTCGCCGGTGCTACAGGTCGCCGTTCAGGATGAGACCAGTGATGATGCTATGCAGATGGCGTCGATGGGCAATGGATATGAAGTGTTCTTGAGTTTTAGTAGAGGCAAAGAGACTCCAGAATCTTTCCCTTCCCGTCTCTATTCATCTCTGACCAAAAAAGGATATTCTGTTTTCAAAAATGAAATATCAATTGAACTATTGCAAAGTGTTCGATGTCCTAAACTTTTCATCATCATCTTCTCTAAAGACTATGTTAGTTCTATAATGTGCCTCGAGGAACTCACAAAAATCATGAAGTTTCGCATGCCATATGGTCATGCAGTTTTTCCCATATTCTATGATGTGAGTCACTCTGAAGTTTGTAATCAAGGATCATTTCAAGGTCGCATGCAAAATGTTTCACCCACTGAAGAGGAAGATTCAAGGTGGGGGAGAGCTCTCCATGAAGCTGCAAGAATCAAAGTTAGGATTGATGCGTCTGCTCACCTCAGCTCTCTACATGATGAGGATGGTATTGAGCCTACTATCGATCTTGTTGATTATTTATTGAAGCCTTTGTATAAGCATAAGATGTTCCCTGTTGGAGTGGATTCTCGTGCTGAGGATGTGATTACAATGCTTCATAACCATAGATCAAAACATGTTGTCTTCATAGGCATATGGGGAATGAGGGGTATAGGCAAAACAACTATTGCCAAAGCCATCTTTAACCACATTCAGTGCGCATTTGAGAGTACATGTTTTCTTCCAAATGTCAGGGAACAATTGGAGGGGAAAGTCGACCTTGTTTCAGCAATATGTGAAGTAACAGGTATAAGAATAGATAGGACTGAATTAGGAAGCCTCGACTTGAATGAAAGGCCTTGCCATAAGAAGGTACTTCTTGTGCTTGACGATGTGAATCAGTTGGAGCAACTAAATACTTTATGTAGAAGTCGCGAACAGTTTGGTGAAGGGAGTATAATAATCATTACAACTGGCGATTTACATCTACTTAATGCCTTTCAAGTGGATTATATATATCGCATGAAACTTTTGAGCAACCAAGAGTCTCTTGAACTTCTCAGTTGGCACTCATTTCAACAAGCATACCCTAAAGAAGAGTTCATCGATATTTGCAAAGAAGTGATTGCTTATGCTGAGGGACTGCCACTGGCTCTTATTACAAACATTGCCTCTATTTTGGATGACGAGGAATTGGATCAATGGGAATCCATAGTGTGGAAAATGGAAGGAGTTATAGACAAACTAAGTTCTAGCTTTGACTATTTAAATGCTGAAGAGAAAGAAATATTTCTAAATATAGTTTTATTTTATATTGGGAGGGACATCGATGATGTGACCCAAAAGCTGAATGCCCATGGAAGTAATGCTCATATTAGGATAGAAGTCCTAAAGGAGCGAGGACTTGTAACCATTGATAACAGCAACAAACTTAGAATGCATAATCTATTGCAGGTCATGGGAAGGCAAGTAATCCGTAGGACTTTACGAAGTGAGCTTGGAAATCCAGCTTACAGGTATGAGGTGTTCTTGAGTTTTAGAGGTGACACTCGGAAAAATTTTACTTCACACCTCTATGCGGCTCTTTATAATGCTGGCATAACTATTTTCAAAGATGATGTTGAGCTTCCCACAGGAAACTATATCAAAACGGAACTCTTGCAAGCAATTGGAAATTCAAAAATCTCAATCATCATCTTCTCTAGTGAATATGCTGGATCTAAATGGTGTTTGGAGGAATTGTCAATGATCATGGGGCTTCGTAAATGGAATGACCGAGTGGTTCTGCCTGTGTTTTACCATGTTGATCCATCAGAAATTCGTCATCAAACTTCCAATTTTGGAGAAGCATTTCAAGATCTTATGCAAAAAATTTCCCGATTAAAAAATCAAATTCCAGCATTAAAATATCAAGTTTTGGATTGGAGGAATGCGCTTACTGAGGCTGGGAGCCTTGCGGGGACAGTTGTACTTAGTTCCAGGGACGAGAGTGAATATGTTAAAGATGTCGTTAGGCAAGTTTGTGATATATTGGACAAGAAAGACTTGTTTGTCGCTGAACACCCAGTAGGAGTGGATAATCGCGTGGAAGAAGTGATCACAATGTTGAAAAACCATCCGTCTGAAGATGTTGCCGTGGTAGGGATATGGGGAATGGGTGGTGTAGGCAAAACAACTATTGCTAAAGCCATTTATAATCAAATGGGTCCCACTTTTGAGGGCAGAAGTTGCCTTTTAAACATCAGAGAAGGATGGGGTCAAGAAGAGAAGAAAGTGTGCTTACAGAACCAACTTCTTTCAGAAATATGCAAGACAACGCAAATGAAGATAAATAGTATCGAAGCAGGAATAATCACATTAAGGGATAGACTTCGCCATAAAAAGGCACTGGTTGTACTTGATGATGTGGATGAGTTAGATCAGCTGAATGCCCTAGTTGGAAGTCGTGACTGGTTTGCTCAAGGAAGTAGAATAATCATTACAACAAGAAATAAACGTCTACTCCATAAAATGGGTTGTCTTGTTTACTCAATGAAAAATTTGGATGATAAGGAATCTATTGAGCTTTTTAGTTGGTATGCATTCAAGCAAAAAAGTCCTAAAAACGATTTCATTGAGCTTTCAAAAAAAATAGTTGCATACTCTGGGAGACTTCCATTAGCTCTTGAAGTCCTTGGATCTTATTTATTTAATAGTGACGACACGAAGGAATGGAATGAAGTATTGGAGAAACTCATAGAAATTCCCAATGACAAGATACAAAAGAAGCTAAAAATAAGCTTTGATGATTTAGATGGTTTGGAGAAAAAAATATTCCTTGATATATGTTGCTTCTTTATTGGGATGGATAGAAATGAAGTGACACAAATATTAAATGGCTGCAAATTCTTTGCTGACATTGGAATCAAAACCCTTGTGGAGCGAAGCCTTATAACCATTGATGAGAAGAACAAGCTTGGTATGCATGATTTGCTGCGTGACATGGGAAGAGAAATAATTCGTGAACACTCTCAAGATGAGCTTGGAAAGAGAAGTAGGCTGTGGTTTCATGAGGATGCACTAGCTGTGTTATTAAAACACAAGGGAACAAAGGCTATTGAAGGACTATCTTTGATGTCAAAAGGTGGAACAATGCATTTGCTTCAGATAGAAGCATTTGAGAAGATGAAGAGACTCAGATTACTTCGTCTTGACAATGTACAACTTAAAGGAGATTACAAATACATCAGTAAAGATCTCAAATGGCTTTGCTGGCATCATTTTCCTATGAAATACATTCCTAGCGACCTTTATCAAGAGGATTTAGTTGTTATAGACTTAAAGCATAGTAGTCTCCGACAAGTGTGGAAGGAATCCCGGTTATTGGAGAGTTTGAAAATCCTCAATCTCAGCCACTCTCCTCACTTGGTGCAAACACCTGATTTTTTGAAACTACCAAATCTTGAAGAGTTAATCCTCAAAGATTGTCCAAGTTTGGACACGATACATCATTCTATTGGGCTTCATCATAAACTTCTTCTGCTAAATTTGGAGAATTGTATTGGCCTTCATAGTCTTCCAAGAAATATTTATAAATTAAAATGCTTGAAAACTCTCATTCTTTCTGGTTGTAAGAATATTGAAAAGCTTGAGGAGGACATAGAGCAAATGGAATCTTTGACAACTCTAGATGCTCCTGCATTAAAACAAGTGCCCTATTCTTTGGTGAGATTGAGAAGCATTTTATATCTATCTGTTTGTGGTCATGAAGGATTATCAAATCATGTGATTCCTTCTCTCTACCGGTCCTGGATGTCCCCAACAAATAATCCACTACCTCTTATTCCATCACATGTGAGCATGCCATCACCAATTTTGTGGGATATGCTATACAGTATCCATAGTCCTTCAACAATCCCAAGTACTGTACCAAAGCACCAAAGTCATTTGTTGGAAGATGGATTGGAGATTTCTGATTCATTGTGTGCCACAAATTGTATGGACATCTCAATACTTAAGAATTGCTTGGAACATCTTTTAATTAACATCGGAAAGAATTCTCAAGTCTTTTGTACACTGTCAAAGAAGATTTCACAGGGATTGAATCTTACAGAGTATGGTGATGACTGTATTCTTCCTGGTGATAATTACCCCTATTGGCTAACATTCAAAGGTGAAGGAACTTCTGTAAAATTTAAAGTGCCTCCAGTTACTGGTCATGATCATTTAAAAGGGATGACTATTTGTTGTGCATATATCCCCTCCAAAGATTTGGATAACAAGGCATGTGAATCTTGGATACTTTACTTAATGATCATAAATTATACAAAGGCAACCACTTTGCCCTACAGAGGAGACGAACTGAAATCCTTGAAAGAAGCAGAGATGAAAGAAATAATATCAAATCTGGAAGCTGATGACCAAGTAGAAGTGAAAGCAGTTTTTGGGAATGGATTCACTGTGAAGAAAACAGCGGTCTACTTGATATACAATGAATCAATTGATAAAAAGATGGAGCCTTCAACATCTGAAGCTGTAAATTTAACTGGCACCAAACACAGTTGTGAGGAGGAGTGCAAGGCACACCAATCTACCAGACCTAGAAAGGCAATGAAGATTTGA 4617 0.384 MRLPSPVLQVAVQDETSDDAMQMASMGNGYEVFLSFSRGKETPESFPSRLYSSLTKKGYSVFKNEISIELLQSVRCPKLFIIIFSKDYVSSIMCLEELTKIMKFRMPYGHAVFPIFYDVSHSEVCNQGSFQGRMQNVSPTEEEDSRWGRALHEAARIKVRIDASAHLSSLHDEDGIEPTIDLVDYLLKPLYKHKMFPVGVDSRAEDVITMLHNHRSKHVVFIGIWGMRGIGKTTIAKAIFNHIQCAFESTCFLPNVREQLEGKVDLVSAICEVTGIRIDRTELGSLDLNERPCHKKVLLVLDDVNQLEQLNTLCRSREQFGEGSIIIITTGDLHLLNAFQVDYIYRMKLLSNQESLELLSWHSFQQAYPKEEFIDICKEVIAYAEGLPLALITNIASILDDEELDQWESIVWKMEGVIDKLSSSFDYLNAEEKEIFLNIVLFYIGRDIDDVTQKLNAHGSNAHIRIEVLKERGLVTIDNSNKLRMHNLLQVMGRQVIRRTLRSELGNPAYRYEVFLSFRGDTRKNFTSHLYAALYNAGITIFKDDVELPTGNYIKTELLQAIGNSKISIIIFSSEYAGSKWCLEELSMIMGLRKWNDRVVLPVFYHVDPSEIRHQTSNFGEAFQDLMQKISRLKNQIPALKYQVLDWRNALTEAGSLAGTVVLSSRDESEYVKDVVRQVCDILDKKDLFVAEHPVGVDNRVEEVITMLKNHPSEDVAVVGIWGMGGVGKTTIAKAIYNQMGPTFEGRSCLLNIREGWGQEEKKVCLQNQLLSEICKTTQMKINSIEAGIITLRDRLRHKKALVVLDDVDELDQLNALVGSRDWFAQGSRIIITTRNKRLLHKMGCLVYSMKNLDDKESIELFSWYAFKQKSPKNDFIELSKKIVAYSGRLPLALEVLGSYLFNSDDTKEWNEVLEKLIEIPNDKIQKKLKISFDDLDGLEKKIFLDICCFFIGMDRNEVTQILNGCKFFADIGIKTLVERSLITIDEKNKLGMHDLLRDMGREIIREHSQDELGKRSRLWFHEDALAVLLKHKGTKAIEGLSLMSKGGTMHLLQIEAFEKMKRLRLLRLDNVQLKGDYKYISKDLKWLCWHHFPMKYIPSDLYQEDLVVIDLKHSSLRQVWKESRLLESLKILNLSHSPHLVQTPDFLKLPNLEELILKDCPSLDTIHHSIGLHHKLLLLNLENCIGLHSLPRNIYKLKCLKTLILSGCKNIEKLEEDIEQMESLTTLDAPALKQVPYSLVRLRSILYLSVCGHEGLSNHVIPSLYRSWMSPTNNPLPLIPSHVSMPSPILWDMLYSIHSPSTIPSTVPKHQSHLLEDGLEISDSLCATNCMDISILKNCLEHLLINIGKNSQVFCTLSKKISQGLNLTEYGDDCILPGDNYPYWLTFKGEGTSVKFKVPPVTGHDHLKGMTICCAYIPSKDLDNKACESWILYLMIINYTKATTLPYRGDELKSLKEAEMKEIISNLEADDQVEVKAVFGNGFTVKKTAVYLIYNESIDKKMEPSTSEAVNLTGTKHSCEEECKAHQSTRPRKAMKI 1538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00055 1538 PRINTS Disease resistance protein signature 718 733 - -
Pral4093g00055 1538 PRINTS Disease resistance protein signature 1125 1141 - -
Pral4093g00055 1538 PRINTS Disease resistance protein signature 795 809 - -
Pral4093g00055 1538 PRINTS Disease resistance protein signature 887 901 - -
Pral4093g00055 1538 ProSiteProfiles TIR domain profile. 28 187 IPR000157 GO:0007165
Pral4093g00055 1538 SUPERFAMILY Toll/Interleukin receptor TIR domain 502 659 IPR035897 -
Pral4093g00055 1538 Gene3D - 349 429 IPR042197 -
Pral4093g00055 1538 Gene3D - 852 937 IPR042197 -
Pral4093g00055 1538 Gene3D Ribonuclease Inhibitor 1037 1268 IPR032675 -
Pral4093g00055 1538 ProSiteProfiles TIR domain profile. 510 683 IPR000157 GO:0007165
Pral4093g00055 1538 Pfam NB-ARC domain 204 415 IPR002182 GO:0043531
Pral4093g00055 1538 Pfam NB-ARC domain 699 923 IPR002182 GO:0043531
Pral4093g00055 1538 SUPERFAMILY "Winged helix" DNA-binding domain 923 1029 IPR036390 -
Pral4093g00055 1538 Gene3D - 189 344 IPR027417 -
Pral4093g00055 1538 Gene3D - 681 849 IPR027417 -
Pral4093g00055 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 438 IPR027417 -
Pral4093g00055 1538 SMART AAA_5 218 354 IPR003593 GO:0016887
Pral4093g00055 1538 SMART AAA_5 715 844 IPR003593 GO:0016887
Pral4093g00055 1538 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 512 1256 IPR044974 GO:0006952
Pral4093g00055 1538 Pfam TIR domain 512 682 IPR000157 GO:0007165
Pral4093g00055 1538 Pfam TIR domain 30 159 IPR000157 GO:0007165
Pral4093g00055 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 688 947 IPR027417 -
Pral4093g00055 1538 SUPERFAMILY "Winged helix" DNA-binding domain 420 499 IPR036390 -
Pral4093g00055 1538 Gene3D - 25 175 IPR035897 -
Pral4093g00055 1538 SUPERFAMILY Toll/Interleukin receptor TIR domain 28 155 IPR035897 -
Pral4093g00055 1538 SMART till_3 29 157 IPR000157 GO:0007165
Pral4093g00055 1538 SMART till_3 511 657 IPR000157 GO:0007165
Pral4093g00055 1538 FunFam Disease resistance protein (TIR-NBS-LRR class) 508 685 - -
Pral4093g00055 1538 SUPERFAMILY L domain-like 1053 1311 - -
Pral4093g00055 1538 Gene3D - 509 680 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00055 Pral-Chr4093 1062242 1073265 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00055 30 522 WRKY Transcription Factor Family AT4G12020 27.961 2.54e-40 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00055 - - pcin:129287786 1475.69