Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4093g00038 | ATGCATTCGAGCGAGTTCGACGGCGCCGCAGCCTTCTCCGGTGGTGGCTTTATGCCGTCTCAGGCAACTCAAGGCCATGAACCTTCCTTCTCCTATTCCAAGAATCGTGATGCTCAATCATTGCTTCCTCTGACGGTCAAGCAGATAAATGATGCTTTTCAGTCAAGTGATGATAAGTCTAATATGATTATCGACGGCGTGGATGTGAATAATGTCACTCTTGTAGGAAGGGTGTGCAACAAAGCTGGAAGGATTACTGATGTTACATTTGTACTAGATGATGGGACTGGAAGAATTGAGTGCAGTAAATGGCTCCAGGAAGATGTAGACGCCAATGAAGCGGAGGGTCTCAGGGATGGAATGTATGTGCGCTTACATGGACACTTGAAAGGTTTTCAGGGAAAAAGGACCTTAAACGTATTCTCTTTTAGGCCTTTGAGCGACTTTAACGAGATTGCAAGTCACTTCATCGATTGTATATACGTCCATCTCTATAATACCAGGATACGGAATAGTGTGCCGAATCAGCAATCTATGAACAATTCCTTACCTATTAATCCCACAAGAGGTTATCAAGCTGCCCCTTCAACTCAATTCTCTGGTCAGCACAACAATGGTCAGAAGAGTGTTGAAGATATGGTCTTGGATATCTTGCATCTTCCCTCGAACAGGGCAAAAGAGGAGGGTGTCTCTCGGGATCTTATTGCACAGCATCTTGGACTTCCTTTGGATAAGCTCATGTTATCCATAAAAAATCTTATTGAGGAAGGCGCCATATATGAAGCTATAGCTGATCATTACAAGTCAATCATCAATGGTTGA | 822 | 0.4367 | MHSSEFDGAAAFSGGGFMPSQATQGHEPSFSYSKNRDAQSLLPLTVKQINDAFQSSDDKSNMIIDGVDVNNVTLVGRVCNKAGRITDVTFVLDDGTGRIECSKWLQEDVDANEAEGLRDGMYVRLHGHLKGFQGKRTLNVFSFRPLSDFNEIASHFIDCIYVHLYNTRIRNSVPNQQSMNNSLPINPTRGYQAAPSTQFSGQHNNGQKSVEDMVLDILHLPSNRAKEEGVSRDLIAQHLGLPLDKLMLSIKNLIEEGAIYEAIADHYKSIING | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4093g00038 | 273 | Pfam | OB-fold nucleic acid binding domain | 72 | 144 | IPR004365 | GO:0003676 | |
Pral4093g00038 | 273 | SUPERFAMILY | "Winged helix" DNA-binding domain | 205 | 269 | IPR036390 | - | |
Pral4093g00038 | 273 | SUPERFAMILY | Nucleic acid-binding proteins | 41 | 168 | IPR012340 | - | |
Pral4093g00038 | 273 | PIRSF | RPA32 | 1 | 271 | IPR014646 | GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310 | |
Pral4093g00038 | 273 | FunFam | replication protein A 32 kDa subunit A-like | 34 | 168 | - | - | |
Pral4093g00038 | 273 | Pfam | Replication protein A C terminal | 163 | 265 | IPR014892 | - | |
Pral4093g00038 | 273 | Gene3D | - | 33 | 168 | IPR012340 | - | |
Pral4093g00038 | 273 | CDD | RPA2_DBD_D | 71 | 164 | - | - | |
Pral4093g00038 | 273 | Gene3D | - | 202 | 271 | IPR036388 | - | |
Pral4093g00038 | 273 | PANTHER | REPLICATION PROTEIN A-RELATED | 5 | 270 | IPR040260 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4093g00038 | Pral-Chr4093 | 734003 | 738218 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4093g00038 | 3 | 270 | Core DNA Replication Machinery Family | AT2G24490 | 45.985 | 5.20e-80 | 241 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4093g00038 | K10739 | - | qsa:O6P43_022320 | 399.438 |