Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00037 ATGAGCTTGGAGGAGTTTCTGGTAAAAGCTGGGGTAGCAAGGAACGAGAGGCCGCACGGATCATCAGCGAAAAACCAGAGGGCGCCTCAATCATCAGCAAAAACTGATAACGAGATGAGCTTGGAGGAGTTTCTAGTTGAAGACGGGTTAGCGAGTAACAAGAAGGCAAATTCATTAGGAAGTAACGAGAGGGCAAATTCATTAGGAAGCATGGGCTTGGAGGAGTTTCTGGTTAGAGCTGGTGTTGTCCGTGATAGGGCTCGGTACGATGTGTTCTTGAGTTTCAGAGGGAAAGATACTCGGTCATCTTTCATTTCTCATCTCTACTCCTTTTTTAGCAATGCTGGAATTGTTGTTTTCAAAGATGATGCAAACCTTCCTAGGGGTAATAGTATCTCAGTCGAATTGCCGCTTGGAATTGAATGTTCTACAATTTCGATCATTATCTTCTCCAAAGATTATGCTGGTTCTAGATGGTGCCTCAACGAGCTCTCAAAAATCATGGAGCTTCACAGAGCACAGGGTCGGGTAGCTCTGCCTGTGTTCTATGGCGTAGATCCGACCCAAGTTCGTAATCAAAGCTCCAGTTTTGGAGATGCATTTCGTGAGCTTATACAAAGAAGTTCACCCACAGAAGATGAAGTGTCGAGGTGGAGGACAGATCTCCGTGAAGCTGGGGGCATTGCAGGGTTTGTTGTGCTCAACTCCAAGGATGAAAGTGAGGATATCAAGAATATCGTTAAGCATGTTTGTAAAATATTGGACAAGAAAGACTTGTTTATTGCTAACCATCCTGTTGGAGTGGACTCTCGTTTGAAAGATTTGATTAAAATATCAGAAAGCTATTCAATTAATGATGTTCTCCTGCTAGGGATATGGGGGATGGGGGGCATCGGTAAAACAACCATTGCCAAAGCCATTTATAATGAAATTGGTCGAAAATTTGAGAGCAGAAGTTTTTTGTCAAACATTAGGGAAGTTTGGGAGCAAGATTCTGGTCCAGTTAACTTACAGCAACAGCTTCTTTCAGAAATCTGTAGAACAACAATGATGGTGATACCTAGCATTGATTCAGGAAAAATCATATTAAAGGAATATCTTTGCCATAAGAGAGCACTTGTTGTACTTGATGATGTGAATGAAGTTGCACAACTAAATGCTTTATTTGGAAGTCGTGAATGCTTTGGTCCGGGAAGCAGAATAATTATCACTACTAGAGATAAGCATATGCTCAAACTCCTTAGAGTGGATCATGTATATGAAATAAAGAACATGGACAAAATAGAATCTATTGAGCTTTTTAGTTGGCATGCATTTAAGCAACCAAGTCCTAAAAAGGGATTCATTGACTTTTCTAGAAATATAGTTGCTTATTCTGGAGGACTACCACTAGCCCTTGAAATCCTCGGCTCCTATTTATTTGATAGGAAAGAGGAAGAGTGGAGAAGTGTACTAGAGAAACTAAAAAGAATCCCCGAAAATGAGATACAAAAGAAGCTAAAAATAAGCTTTGATGGTTTAAGCGATGATACGGTGAAAGAAATCTTCCTTGATATATCTTGCTTCTTTATTGGGATGGATAGGAGTGATGTCACGCAGATATTGGATGGTAGTGGACTTTTTCCGCACATTGGAATAAGTGTCCTTGTGGAGCGAAGCCTAGTAACTGTTGATGAGAAGAACAAGCTTGGCATGCATGATTTGCTGCGAGATATGGGGAGAGAGATCATCCGAGAACAATCACCAAAGGAGCTTGGAAAGCGTACTAGGTTATGGTTCCATGAAGATGCATTTGATGTATTATCAAAACATACTGGTACAGAATTTGTCGAGGGGCTAGCTTTGAGTTTGTCACAAACTGATAGAGATTATTTTTCTACCAAGGCGTTTAAGCAGATGAAGACACTTAGATTACTCCGCCTTGGTAATGTGGAACTTGATGGAGACTTTAAATACATGAGCAGAGATCTCAGATGGCTTTATTGGCTTGGCTTTCCTTTGAAATACATCCCTGCCAACTTTTATCAGAAAAATTTAGTTTCTATTGAGTTGAAGTACAGTAGCCTTAAACAAGTTTGGAGGGAGCCCCAGTTATTGGAGAGGCTAAAAATCCTTAATTTGAGTCACTCCCTTTTTTTGGTGCAGACTCCTGACTTCTCAAAACTACCGAATCTTGAAAAGTTGATTCTTAAAAATTGTCCAAATTTGTCCAAGGTTCATCCTACCATCAGTCATGCCAATAAACTCATTTTAATAAATTTGAAGGATTGTACTAGCCTTCGCACTCTCCCAAGAAGTATTTATAATTTAAAATCACTGAAAACTCTTATTCTGTCTGGTTGTGCGAGGATTGAAAAATTAGAAGAAGATATAGAGCAAATGGATTCCTTGACAACTCTGATTGCTGACAACACTGCAATAACAGAAGTGCCTTTATCTTTAGTGAGGCTAAAAAGTGTTGGATATATATCTCTTTGTGGCTACAGGGGATTATCACGTGATGTGTTTCCTTCTCTCATTTGGTCACGGATGTCCCCAGTAAATAATCCTTTATCTCTTATTCCATCATATGTGGTCATGCCAATTTCCTTGGATATATTGAATAGCAATGTCCCTAGTCCTTCATCTGTCTATAATAACCTCGCAAAGCTACGAAGCCTTTTGTTGGGAATCATATCAGAGAATGACCCTGAAGTAATTCGAGGTGCTGCAAAAATTTGGGAATCCTTTCATGCCAGAATTTGCATGGACATGGCAACAATACCAAATACTTCAAAAATCTTTGAGATTGAATCTTCTGTGTTAACTGGTCATCATAGTCAGGTTCACATCTCAAGATCAGAAAATTTTTTGAGGCATCTTCTAATTCAAATTGGAAAGAATGACCAAGTCACTGCTACTCTTCTGGAGAATATCTCACAGGGATTGACTCCCAGGAATTATAGTGATGCATATGTCCTTCCTGGCGACAATTACCCCTATTGGCAATGTTTTAAGGGTGAAAGAGCTTCTGTGAAGTTTAAAGTGCCTCGGATTAGCGGTCATGATTTGAAAGGGATGATTATTTGCTGTGCATATTTCCCTTCAAGTGATTTGAGTAAGAAGGCATGTGAATCTTGTGTTAGTGTAATGATCATAAATTATACAAAGACAACCACTCTGTGCTACAGGCAAGATTCACTGACTTCATTTGAAGAAGCTGAGTGGAAGAAAATAATATCAAATCTAGACTCAGATGACCAAGTGGAGGTGATGGTAGTTTTTGGTAATGGATTCACTGTGAAAAGGACAACAATCTACTTAAAATACGACGAGTCATTTGATGAACAGATAGAGCATCCACCATTACCAAGTAGAGAAGTTGAGAAGAAGAACATGCAGACTTATGTTAGAAGGAGGAAGCGACAAAAGATTAATTAG 3420 0.3942 MSLEEFLVKAGVARNERPHGSSAKNQRAPQSSAKTDNEMSLEEFLVEDGLASNKKANSLGSNERANSLGSMGLEEFLVRAGVVRDRARYDVFLSFRGKDTRSSFISHLYSFFSNAGIVVFKDDANLPRGNSISVELPLGIECSTISIIIFSKDYAGSRWCLNELSKIMELHRAQGRVALPVFYGVDPTQVRNQSSSFGDAFRELIQRSSPTEDEVSRWRTDLREAGGIAGFVVLNSKDESEDIKNIVKHVCKILDKKDLFIANHPVGVDSRLKDLIKISESYSINDVLLLGIWGMGGIGKTTIAKAIYNEIGRKFESRSFLSNIREVWEQDSGPVNLQQQLLSEICRTTMMVIPSIDSGKIILKEYLCHKRALVVLDDVNEVAQLNALFGSRECFGPGSRIIITTRDKHMLKLLRVDHVYEIKNMDKIESIELFSWHAFKQPSPKKGFIDFSRNIVAYSGGLPLALEILGSYLFDRKEEEWRSVLEKLKRIPENEIQKKLKISFDGLSDDTVKEIFLDISCFFIGMDRSDVTQILDGSGLFPHIGISVLVERSLVTVDEKNKLGMHDLLRDMGREIIREQSPKELGKRTRLWFHEDAFDVLSKHTGTEFVEGLALSLSQTDRDYFSTKAFKQMKTLRLLRLGNVELDGDFKYMSRDLRWLYWLGFPLKYIPANFYQKNLVSIELKYSSLKQVWREPQLLERLKILNLSHSLFLVQTPDFSKLPNLEKLILKNCPNLSKVHPTISHANKLILINLKDCTSLRTLPRSIYNLKSLKTLILSGCARIEKLEEDIEQMDSLTTLIADNTAITEVPLSLVRLKSVGYISLCGYRGLSRDVFPSLIWSRMSPVNNPLSLIPSYVVMPISLDILNSNVPSPSSVYNNLAKLRSLLLGIISENDPEVIRGAAKIWESFHARICMDMATIPNTSKIFEIESSVLTGHHSQVHISRSENFLRHLLIQIGKNDQVTATLLENISQGLTPRNYSDAYVLPGDNYPYWQCFKGERASVKFKVPRISGHDLKGMIICCAYFPSSDLSKKACESCVSVMIINYTKTTTLCYRQDSLTSFEEAEWKKIISNLDSDDQVEVMVVFGNGFTVKRTTIYLKYDESFDEQIEHPPLPSREVEKKNMQTYVRRRKRQKIN 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00037 1139 SUPERFAMILY L domain-like 578 891 - -
Pral4093g00037 1139 Gene3D - 86 252 IPR035897 -
Pral4093g00037 1139 Pfam NB-ARC domain 286 494 IPR002182 GO:0043531
Pral4093g00037 1139 SUPERFAMILY Toll/Interleukin receptor TIR domain 83 231 IPR035897 -
Pral4093g00037 1139 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 89 910 IPR044974 GO:0006952
Pral4093g00037 1139 Gene3D Ribonuclease Inhibitor 615 904 IPR032675 -
Pral4093g00037 1139 FunFam Disease resistance protein (TIR-NBS-LRR class) 85 256 - -
Pral4093g00037 1139 Gene3D - 253 419 IPR027417 -
Pral4093g00037 1139 MobiDBLite consensus disorder prediction 8 37 - -
Pral4093g00037 1139 Pfam TIR domain 89 252 IPR000157 GO:0007165
Pral4093g00037 1139 SMART till_3 88 228 IPR000157 GO:0007165
Pral4093g00037 1139 Gene3D - 424 508 IPR042197 -
Pral4093g00037 1139 MobiDBLite consensus disorder prediction 22 37 - -
Pral4093g00037 1139 PRINTS Disease resistance protein signature 289 304 - -
Pral4093g00037 1139 PRINTS Disease resistance protein signature 768 784 - -
Pral4093g00037 1139 PRINTS Disease resistance protein signature 459 473 - -
Pral4093g00037 1139 PRINTS Disease resistance protein signature 366 380 - -
Pral4093g00037 1139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 260 519 IPR027417 -
Pral4093g00037 1139 SUPERFAMILY "Winged helix" DNA-binding domain 495 601 IPR036390 -
Pral4093g00037 1139 ProSiteProfiles TIR domain profile. 87 254 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00037 Pral-Chr4093 724428 731383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00037 89 817 WRKY Transcription Factor Family AT4G12020 31.635 9.50e-89 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00037 - - pcin:129288835 1675.99