Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00032 ATGGCGAAGCCGAAAGCTGAGTTGCCTTCACCCTTCGATAAGCTGCCTAAAGATAAAAAAATGAACCGTACGGATCGACTATCTGTGAAGAGCAAAGGCCATTACCCCATCAGTGGTGCGGCCCATCAGATGAAGCTGGAGCTGCTGCTGTTCCATCAGCTGACGCAGCTGCATAGGGCCCGGTACGATGTTTTCTTGAGCTTCAGAGGTGAAGACACTCGGGCATCTTTTACTTCTCATCTCTCCTCTGCTCTAAGCAATGCTGGAATTCTTGTTTTCAAAGATGATTCAAACCTTCCTCGGGGAAACCATATCTCAATCGAGTTGCCACATGGAATTGAACAATCTACAATTTCAATTATTATCTTCTCCAAGAATTATGCTGGTTCTAAATGGTGTCTCAACGAGCTCTCAAAAATTATGGAGCTTCACAGATTACTAGGTCGGGTAATTCTGCCTGTGTTCTATGGTGTGGATCCGTCCGAAGTTCGTAATCAAATGTCGAGTTTTGGAGCAGCGTTTCGAAATCTTATGCAAAGAAGTTCTCCCACGGAAGATGAAGTGTCGAGGTGGAGGACAGACCTAGGTGAAGCCGGGGGCATTGCCGAGTTTGTTGTGCTCAATTCCAAGAATGAAAGTGAGGATATCAAGACTATCGTTGAGTGTGTCTGTAAAATATTGGACAAGAAAGACTTGTTTATTGCTAACCATCCTGTAGGACTGGACTCTCGTTTGGAAGATTTGATTAAAAGATCAAAAAGCCATTCAATGAATGGTATTCTCCTCCTAGGAATATGGGGGATGGGGGGTGTCGGCAAAACAACTATCGCCAAAGCCATCTATAATAAAATTGGTCGAGAATTTGCTAGCAGAAGCTTTCTTTCAAACATTAGGGAAGTTTGGGGGCAAGATAATGGTCCAATTAGCCTACAGCAACAGCTTTATTCAGAAATCTGCAAAACAATGGTGGCAATACGTAGCATTGATTCAGGAAAAATCACATTGCAGGAGTCTCTTTGCCATAAGAAAGCACTTGTTGTGCTTGATGATGTGAATGAGGTTAAGCAACTAGATGCTTTATTGGGAAGTCGTGACTGGTTTGGTCTAGGAAGTAGAATAATAATCACTACTAGAGATAGGCATCTGCTCGAACTCCTTGACGCGGATCATGTATATAAAATAAAGGAAATGGACGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTTAAGCAACCAAGTCCGAAAAAGGTATTCGTTGACCTTTCTAGAAATATAGTTGCTTATTCTGGAGGACTACCTCTAGCCCTTGAAATCCTAGGCTCCTATCTATTTGAGAGGGAAAAGAAAGAGTGGAGAAGTGTACTGAACAAACTAAAAAGAATCCCCAATAATGAGATACAAAAGAAGCTAAGAATAAGCTTTGATGGTTTAAGTGATGATATTGTGAAAGAAATCTTCCTTGATATATCTTGCTTCTTTATTGGGATGGATAGGAGTGATGTCACACGAATATTGGATGGTAGTGGTCTTTTTCCAGACATTGGAATTAGTGTCCTTGTGGAGCGGAGCCTTGTAACTGTTGATGAGAAGAACAAGCTAGGCATGCATGATTTGTTGCGAGATATGGGGAGGGAGATAATCCGAGAACAATCACCAAAAGAACTTGGAAAGCGTAGTAGGTTATGGTTTCATGAAGATGTGCATGATGTATTATCAAAACATACTGGTACAGGATTTGTCGAGGGGCTAGCTTTGAATTTGTCACAAACCAATAAAGATTGTTTTTCTACCAAAGCGTTTAAGCAGATGAAGACACTTAGATTACTCCGCCTTGGTAATGTGGAACTTGATGGAGACTACAAGTACATTAGCAGAGATCTCAGATGGCTTTATTGGCTTGGCTTTCCTTTGAAATACATCCCTGCCAACTTTTATCAGAAAAATTTAGTTGCTATTGAGTTAAAGTATAGTCGGCTTAAACGAGTTTGGAGGGAGCCCCAGTTATTGGAGAGGCTAAAAATCCTCAATTTGAGTCACTCCTCTTTTTTGATGCAGACTCCTGACTTCTCAAAACTACCAAATCTTGAAAAGTTGATTCTTAAAAATTGTCCAAATTTGTCCAAGGTTCATCCTACCATCGGGCATGCCAATAAACTCCTTTTAATAAATTTGAAGGATTGTACTAGCCTTTGCACTCTCCCAAGAAGTATTTATAATTTAAAATCACTAAAAACTCTTATTCTGTCTGGTTGTGTGAGGATTGAAAAATTAGAAGAAGATATAGAGCAAATGGATTCCTTGACAACTCTGATTGCTGATGACACTGCAATAACAGAAGTGCCTTTATCTTTGGTGAGGCTAAAAAGTGTTGGATATATATCTCTTTGTGGCTATAGGGGATTATCACGTGATGTGTTTCCTTCCCTCATTTGGTCACGGATGTCCCCAACAAATAATCCTTCATCTCTTATTCCATCACATGTGGGCATGCAAGTTTCCTTAGATGTATTGAATGGTAATGCCCCTGGTCCTTCATCTGTCTGTAATAACCTCTCAGAGCTACGAATCCTTTTGTTGGGAATCATATCAGAGAATGACCCTGAAGTAATTCGAGGTGCTACAAAAATTTGGGAATCCTTTCATGCCAGAATTTGCACGGACATGGCAACAATTCCAAATACTTCAAAAATCTTTGAGATTGAATCTTCTGTGTTAACTAGTCATCATAGTCAGGTTCACATCTCAAGATCAGAAAATTTTTTGAGGCATCTTCTAATTCAAATCGGAAAGAATGATCAAGTCACTGCTATTCTTCTGGAGAATATCTCACAGGGATTGACTCCCAGGAATTACAGTGATGCTTACATCCTTCCTGGCGACAATTACCCCTGTTGGCAAAGTTTTAAGGGTGAAAGAGCTTCTGTGAAGTTTAAAGTACCTCGGGTTAGCGGTCGTGATTTAAAAGGGATGATTATATGTTGTGCCTATTCCCCTTCAAGTGATTTGAGTAACAAGGCATGTGAATCTTGTGTTAGTGTAGTGATCATAAACTATACAAAGACAACCACTCTGTGTTACAGGCAAGATTCACTGACTTCATTTGAAGAAGCTGAGTGGAAGCAAATAATATCCAATCTAGACTCAGATGACCGAGTGGAAGTGATCGTAGTTTTTGGCAATGGATTCATTGTGAAAAGGACAACAATCTACTTAAAATACGACGAGTCATTTGATGAACAGATAGAGCATCCACCATCACCAAGTATTGTTAGCTTCTTGAAACCATCTTATTTTGCACAATGTTTAAGAGTTAAATCCGATTAA 3330 0.3991 MAKPKAELPSPFDKLPKDKKMNRTDRLSVKSKGHYPISGAAHQMKLELLLFHQLTQLHRARYDVFLSFRGEDTRASFTSHLSSALSNAGILVFKDDSNLPRGNHISIELPHGIEQSTISIIIFSKNYAGSKWCLNELSKIMELHRLLGRVILPVFYGVDPSEVRNQMSSFGAAFRNLMQRSSPTEDEVSRWRTDLGEAGGIAEFVVLNSKNESEDIKTIVECVCKILDKKDLFIANHPVGLDSRLEDLIKRSKSHSMNGILLLGIWGMGGVGKTTIAKAIYNKIGREFASRSFLSNIREVWGQDNGPISLQQQLYSEICKTMVAIRSIDSGKITLQESLCHKKALVVLDDVNEVKQLDALLGSRDWFGLGSRIIITTRDRHLLELLDADHVYKIKEMDESESIELFSWHAFKQPSPKKVFVDLSRNIVAYSGGLPLALEILGSYLFEREKKEWRSVLNKLKRIPNNEIQKKLRISFDGLSDDIVKEIFLDISCFFIGMDRSDVTRILDGSGLFPDIGISVLVERSLVTVDEKNKLGMHDLLRDMGREIIREQSPKELGKRSRLWFHEDVHDVLSKHTGTGFVEGLALNLSQTNKDCFSTKAFKQMKTLRLLRLGNVELDGDYKYISRDLRWLYWLGFPLKYIPANFYQKNLVAIELKYSRLKRVWREPQLLERLKILNLSHSSFLMQTPDFSKLPNLEKLILKNCPNLSKVHPTIGHANKLLLINLKDCTSLCTLPRSIYNLKSLKTLILSGCVRIEKLEEDIEQMDSLTTLIADDTAITEVPLSLVRLKSVGYISLCGYRGLSRDVFPSLIWSRMSPTNNPSSLIPSHVGMQVSLDVLNGNAPGPSSVCNNLSELRILLLGIISENDPEVIRGATKIWESFHARICTDMATIPNTSKIFEIESSVLTSHHSQVHISRSENFLRHLLIQIGKNDQVTAILLENISQGLTPRNYSDAYILPGDNYPCWQSFKGERASVKFKVPRVSGRDLKGMIICCAYSPSSDLSNKACESCVSVVIINYTKTTTLCYRQDSLTSFEEAEWKQIISNLDSDDRVEVIVVFGNGFIVKRTTIYLKYDESFDEQIEHPPSPSIVSFLKPSYFAQCLRVKSD 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00032 1109 Gene3D - 396 480 IPR042197 -
Pral4093g00032 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 491 IPR027417 -
Pral4093g00032 1109 Gene3D - 57 234 IPR035897 -
Pral4093g00032 1109 Pfam TIR domain 62 224 IPR000157 GO:0007165
Pral4093g00032 1109 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 62 896 IPR044974 GO:0006952
Pral4093g00032 1109 SMART till_3 61 201 IPR000157 GO:0007165
Pral4093g00032 1109 SUPERFAMILY "Winged helix" DNA-binding domain 467 573 IPR036390 -
Pral4093g00032 1109 Gene3D - 235 393 IPR027417 -
Pral4093g00032 1109 ProSiteProfiles TIR domain profile. 60 227 IPR000157 GO:0007165
Pral4093g00032 1109 Pfam NB-ARC domain 257 468 IPR002182 GO:0043531
Pral4093g00032 1109 FunFam Disease resistance protein (TIR-NBS-LRR class) 58 229 - -
Pral4093g00032 1109 PRINTS Disease resistance protein signature 740 756 - -
Pral4093g00032 1109 PRINTS Disease resistance protein signature 338 352 - -
Pral4093g00032 1109 PRINTS Disease resistance protein signature 431 445 - -
Pral4093g00032 1109 PRINTS Disease resistance protein signature 262 277 - -
Pral4093g00032 1109 SUPERFAMILY Toll/Interleukin receptor TIR domain 58 200 IPR035897 -
Pral4093g00032 1109 Gene3D Ribonuclease Inhibitor 576 868 IPR032675 -
Pral4093g00032 1109 MobiDBLite consensus disorder prediction 10 28 - -
Pral4093g00032 1109 MobiDBLite consensus disorder prediction 1 28 - -
Pral4093g00032 1109 SUPERFAMILY L domain-like 549 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00032 Pral-Chr4093 628471 648228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00032 62 789 WRKY Transcription Factor Family AT4G12020 30.441 4.21e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00032 - - pcin:129288835 1645.17