Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00028 ATGTGTTCTTGGACCTCAGGGGAAGACGCTCGGGCGTCTTTCACTTCTCACCTCCACTCCTCTTTAAGCAATGCTGGCATTCTTGTTTTCAAAGATGACTTAGACCTTCCTAAGGCGAATAGGTCGGGAGTTCTGCCTGTGTTTTATGGCGTGGATCCTTCCCAAGTTCGTAAGCAAATCTCTAGTTTTGGAGAAGCGTTTCGAGATCTTATACAAAGAAGTTCACCCACAGAAGATGAAGTGTTGAGGTGGAGGACAGATCTCCGTGAAGCTGGGGGCACTGCGGGGTTTGTTGTGCTCAAGTCCAGGAATGAAAGTGAGGATATCAAGAATCATGTTTGTGAAATATTGGACAAGAAAGACTTATTTATTGCCAACCATCTCGTAGGATTGAATTCTCGAATGCAAAATTTGATTAAAATGTCACAAGGCCATCCACCAAATGATGCTCTCCTGCTAGGGATATGGGGGATGGGTGGTATAGGAAAAACAGTAATTGCCAAAGCCATTTACAATGAAATTGGTCAAAATTTTGAGAGCAGAAGTTTTCTTTCAAATATTAGGGAAGCTTGGGAGCAAGATCGTGGTCCAGTTTACTTACAACAGCAACTTCTATCACAAATCTGTAAAACAACAAAGATGATAATACCTTGCATTGAATCAGGAAAACACATATTAAGAGAAAGACTTTGCCAAAAGCAGGCTGTTGTTGTGCTAGATGATGTGGATAAGGTGGAGCAACTAAATGCTTTATCTGGAATTGTTAAATGGTTTGGTCCAGGAAGTAGAGTAATTATCACGACTAGAGATGAGCATATACTAAGATTCCTTAACGTGGATATGAACTGTGTATATAGAGTAAAGAACATGGAGAGAAGTGAATCTATTGAGCTTTTCAGCTGGCATGCGTTTAGGCAACCAAGCCCTAAAGAAGGGTTTGTTGAACTTTCTAGAAATATAGTTGCTTATTCTGGAGGACTGCCACTTGCTCTTGAAATTCTTGGCTGCTATTTGTTTGACAGGGAAGTGACAGAGTGGAAGAGTATACTGGAAAAACTGAAAAAAATCCCCAATGGTCAGATACAAAAGAAGCTAAAAATAAGCTTTGATGGTTTAAATGATGATATAGAGAGGGAAATCTTCCTTGATATATCTTGCTTCTTTATTGGAATGGATAGGAATGATGTCACACAGATATTGAATGCCAGTGGATTTTTTGTGGACATTGGAATCAGTGTCCTTGTGGAGAGAAGCCTCGTGACTATTGATGAGAAGAACAAGCTCGGTATGCATGATTTGTTGCGAGACATGGGAAGAGAAATAATCCGTGAAAGGTCACCAAAAGAATTTGGAAAGCGCAGTAGGTTATGGTTTCCAGAAGATGTGATCAATGTATTATCAAAACATAGGGGTACAAAATCAGTTGAGGGGCTAGCTTTGAATCTATCTCGAGGTGATAAAGTTTATTTTTTAACCAAAGCATTTAAGAAGATGAGGACACTTAGACTGCTTCGTCTTGGTAATGTGGAACTTGATGGGGACTATAGATACATCAGTAGAGATCTGAAATGGCTCTCTTGGCACAAGTTTCCTTTGAAATGCAACCCTGCCAACTTCTTTCAGAATAATTTGGTCGCCGTTGAATTAACATTTAGTAGCTTGAGATTTTGGAGGGAACCCCAGTTATTGGAGAATCTGAAAATCCTCAATCTCAGCCACTCTCCTTACTTGGTGTGTACTCCTAATTTTTCAAAATTACCAAGTCCTGAAAAGTTGATCCTCAAAGATTGTCCAAGTTTGTCCATGATACATCATACGATAGGGCATCTGGATAGAATTCATCTGCGAAATTTGAAGGATTGTACTGGCCTTCGTAGTCTCCCAAGAAGCATTTATAAATTGAAGAGCTTAAAAACTCTAATTCTTTCTGGTTGTTTGATGATTGAAAAGGTAGAGGAAGACATAGAGCAGATGGATTCTTTGTCACCTTTAATTGCAGATAACACAGCAATAACTCAAGTGCCCATTTCTTTGCCGGCCCGGTACGATGTGTTCTTAAGTTTTAGAGGGGAAGACACTCGGCCATCTTTCACTTCTCATCTCTACTCTTCTTTGAGCAATGCGGGAATTCTTGTCTTCAAAGATGATTCAGACCTTCCTAGGGGAAATAATATCTCAATGGAATTGCCTCTGGCAATTGAACAATCTACAATTTCAATCATTATCTTCTCCAAAGATTATGCGGGTTCTGGATGGTGCCTCAACGAGCTCTCCAAAATCATGGAGCTTCACAGAACACAGGGTCGGGTAGTTCTGCCTGTGTTTTATGGCGTGGATCCATCCGAAGTTCGTAATCAAAGATCTAGTTTTGGAGAAGCACTTGAAGTTCTTATACAGAGAAGTTCACCCACAAAAGATCAAGTGCCGAGGTGGAGGACAGATCTCCGTGAGGCTGGGAGCATTTCAGGGTTTGTCATGCTCAATTCCAGGAATGAAAGTGAGGATATCATGAATATTGTTGAGCATGTTTGTGAAATATTGGACAAGAAAGACTTGTTCGTTGCTAACCATCCTGTAGGAGTAAACTCTCGCGTGCAAGATTTGATCAAAATGTCAAAAAGCCATCCACCAAATGATGTTCTCCTCCTTGGGATCTGGGGGATGGGTGGTCTAGGCAAAACAGTAATTGCCAAGGCCATTTACAATGAAATTGGTGGAAATTTTGAGAGCAGAAGTTTTCTTTCAAATATTAGGGAGGTCTGGGAGCAAGATCATGGTCCAGTTTACTTACAACAGCAACTTCTTTCACAAATCTGTAAAACAACAAAGATGCCAATACCTTGCATTGAATCAGGAAAAAACATGCTAAAAGAAAGACTTCGCCAAAAGCAAACACTTGTAGTGCTTGATGATGTGGATAAGGTGGAACAACTAAATGCTTTATCTGGAAGTGTTAAATGGTTTGGTCTAGGAAGTAGAATAATTATCACAACCAGAGATGTACATTTACTAAGATTTCTTAACGTGGATTTGGACCATGTATATAGAGTAAAGAACATGGACGAAAATGAATCTATTGAGCTTTTCAGTTGGCATGCGTTTAGGCAGCCGAGTCCTAGAGAAGGATTTGTTGAACTTTCTAGAAATATAGTTGCTTATTCTGGTGGACTACCACTAGCTCTTGAAATTCTTGGCTGCTATTTGTTTGATAGGGAAGTGACAAAGTGGAAGAGTGTACTAGACAAACTGAAAAAAATCCCAAATGGTCAGATACAAAAGAAGCTAAAAATAAGCTTTGATGGTTTAAATGATGATACAGAGAGGGAAATCTTCCTTGATATTTCTTGCTTCTTTATTGGAATGGATAGGAATGATGTCACACAAATATTAAATGCCAGTGGATTTTTTGCGGACATTGGAATTAGTGTCCTTGTGGAGAGAAGCCTCGTGACTATTGATGAGAAGAACAAGCTTGGTATGCATGATTTGTTACGAGATATGGGAAGAGAAATAATCCGTGAAAAGTCACCAAAAGAATTTGGAAAGCGTAGTAGGTTATGGTTTCAGGAGGATGTGATCGATCTGTTATCAAAACATATGGGTACAGAATCTGTGGAGGGGCTAGCTTTGAATCTGTCACAAGATGGTAAAGTTTATTTTTTAACCAAAGCATTTAAGAAGATGCAGACACTCAGACTGCTTCGTCTTGCTAATGTGGAACTTGATGGAGACTATAGACACATTAGTAGAGATCTCAAATGGCTCTGTTGGCACAAATTTCCTTTCAAATACATCCCTGCGAACTTCCTTCAAAATAATTTAGTCGCTATTGAATTAAAATACAGCAGTCTGAGACTCTGGAGGGAGCCCCAATTATTGGAGAATCTAAAAATCCTCAATCTTAGCCACTCTCCTTACCTGGTGTTTACTCCTGATTTTTCAAAGCTACCAAATCTTGAAAAGTTGATCCTCAAAGATTGTCCAAGTTTGGCCACGATACATAATACAATAGGGCATCTTGGTAAAATTCATCTAATAAATTTGAAGGATTGTACTGGCCTTTGTAGTCTCCCAAGAAGCATTTATAAATTGAAGTGCTTAAAAACTCTCATTCTTTCTGGTTGTTTGATGATCGAAAAGTTAGAGGAAGATATAGAGCAGATGGATTCTTTGTCAACTCTAATTGCGGATAACACAGGAATAACTGAAGTACCCATTTCCTTGGCGAGATCAAAAAGCATTGGCTATATATCTGTTTGTGGTTACCAAGGGCTTGCACGTCATGTGTTTCCGTCCCTCATTTGGTCAAGGATGTCTCCAACGAACAATCCTCTTTCTCTTATTCCGAGATATGCTAGCACGCCAGCTTCAGTTTTCTTATGTGAAAACAATTGCAGTATCTCATGTCCTTCATCGATTCATGACAACCTTCTAAAGCCCCAAAGCCTTTCATTAGAATGCACATCAGAGAATGAAGCTAAGGTAAATCGAGATGCTACAAAAATCTTGGATTCCCTGTGTGCCATAAGTAGCAGGGACATGGCAAAGACACCAAATACTTCAAAAATCTTGGAGATTGAATCTTCTGTGTTGGCTGATCATCATAGTCAAGTTGACATCTCAAGGCCAAACGAATGTTCGAGACATCTTCTAATTCATATTGGAAACAATGACCAAGTCACTAATGCTCTTTCAGAAAGTATTTTACAGGGACTAACTGTCAGAGATGATGGTGATGATTGTGTCCTCCCGGGTGACAAATATCCCTGTTGGCAATGCTTCAAGGGTGAAGGAGCTTCTGTAAAATTTAGAGTGCCTCTAGTTAGTAGCCATGAGTTAAAAGGGATGACTGTTTGCTGTGAATATCACCCCTCAGGTGATTTGGGAAATGTGGATATTGACTCTTTCATTACCATGGTGATCACAAACTATACAAAGACAACGACACTACTCTATGGGCGAGGCGTAGTGACTTCCTTTGAAGAAGCAAATTGGAAGGAAATAATATCAAATCTGGACTCTAATGACCAAGTGCATATCATTGTACTTTTTGGTAATGGGTTCATTGTGAAAAGAACAGCAGTTTACTTGAAATATGACGAGTCATTTGATGAACTGATAGAGGATCCACCATCATCAAGTAGAGAATTGCATAGGGATGATAAAAACCATGATTTCAAGCTGTCGGAGCCTAAGCGTCAGAGATTTTTATATATCTTAAAAGTGATCCGATCCGGCTGGTTGGACCGTCAGCCGGACTTAACAGCGATTTGTTCTGCTCCTAGGAATCGTTTCTGGGTTGAGCCGGATCAGACCGGTGAGAAGCGACGCTTGAGGCGGAACCCGGGACGGGGTTTTAGTAAACCGGACGGACTTCTTGAAGCTGGAATTCGAAAACTGTTGGATGTGACGGACCTGGAACCACATTCTCCTACTTCACATGGACAGAGACCTGCTAGGAGGCTGAGAGAAGACGAGAATCCGTCTGGATTACCTCTTCCGGTAAATGATGTTTCTGCCGACAATGGAGTTGGAGATGAAAGTAGTATTTCATACTGCGACAACCCAGCTTGCAAAGCTGCCCTAAGTGAAGCAGATGTGTTCTGTAAAAGATGCTCATGCTGCATTTGTCATAACTATGATGAGCACAAAGATCCTAGCCTTTGGTTAAACTGTAGCTCTGAGCCTCCATTTGTTGGTGTTTCTTGTTGCTCGTCATGTCATCTTGAGTGTGCTTTAGAGCATGATAATTCTGGCATTGCCGAAGATGGGAGACGTCCCAAGCTTGATGGAAGCTTCTACTGCATCTCATGTGGGAAAGTGAATGATTTGCTAGGGAGGGAAGGGAGAGAAGGATTTTAA 5862 0.4038 MCSWTSGEDARASFTSHLHSSLSNAGILVFKDDLDLPKANRSGVLPVFYGVDPSQVRKQISSFGEAFRDLIQRSSPTEDEVLRWRTDLREAGGTAGFVVLKSRNESEDIKNXHVCEILDKKDLFIANHLVGLNSRMQNLIKMSQGHPPNDALLLGIWGMGGIGKTVIAKAIYNEIGQNFESRSFLSNIREAWEQDRGPVYLQQQLLSQICKTTKMIIPCIESGKHILRERLCQKQAVVVLDDVDKVEQLNALSGIVKWFGPGSRVIITTRDEHILRFLNVDMNCVYRVKNMERSESIELFSWHAFRQPSPKEGFVELSRNIVAYSGGLPLALEILGCYLFDREVTEWKSILEKLKKIPNGQIQKKLKISFDGLNDDIEREIFLDISCFFIGMDRNDVTQILNASGFFVDIGISVLVERSLVTIDEKNKLGMHDLLRDMGREIIRERSPKEFGKRSRLWFPEDVINVLSKHRGTKSVEGLALNLSRGDKVYFLTKAFKKMRTLRLLRLGNVELDGDYRYISRDLKWLSWHKFPLKCNPANFFQNNLVAVELTFSSLRFWREPQLLENLKILNLSHSPYLVCTPNFSKLPSPEKLILKDCPSLSMIHHTIGHLDRIHLRNLKDCTGLRSLPRSIYKLKSLKTLILSGCLMIEKVEEDIEQMDSLSPLIADNTAITQVPISLPARYDVFLSFRGEDTRPSFTSHLYSSLSNAGILVFKDDSDLPRGNNISMELPLAIEQSTISIIIFSKDYAGSGWCLNELSKIMELHRTQGRVVLPVFYGVDPSEVRNQRSSFGEALEVLIQRSSPTKDQVPRWRTDLREAGSISGFVMLNSRNESEDIMNIVEHVCEILDKKDLFVANHPVGVNSRVQDLIKMSKSHPPNDVLLLGIWGMGGLGKTVIAKAIYNEIGGNFESRSFLSNIREVWEQDHGPVYLQQQLLSQICKTTKMPIPCIESGKNMLKERLRQKQTLVVLDDVDKVEQLNALSGSVKWFGLGSRIIITTRDVHLLRFLNVDLDHVYRVKNMDENESIELFSWHAFRQPSPREGFVELSRNIVAYSGGLPLALEILGCYLFDREVTKWKSVLDKLKKIPNGQIQKKLKISFDGLNDDTEREIFLDISCFFIGMDRNDVTQILNASGFFADIGISVLVERSLVTIDEKNKLGMHDLLRDMGREIIREKSPKEFGKRSRLWFQEDVIDLLSKHMGTESVEGLALNLSQDGKVYFLTKAFKKMQTLRLLRLANVELDGDYRHISRDLKWLCWHKFPFKYIPANFLQNNLVAIELKYSSLRLWREPQLLENLKILNLSHSPYLVFTPDFSKLPNLEKLILKDCPSLATIHNTIGHLGKIHLINLKDCTGLCSLPRSIYKLKCLKTLILSGCLMIEKLEEDIEQMDSLSTLIADNTGITEVPISLARSKSIGYISVCGYQGLARHVFPSLIWSRMSPTNNPLSLIPRYASTPASVFLCENNCSISCPSSIHDNLLKPQSLSLECTSENEAKVNRDATKILDSLCAISSRDMAKTPNTSKILEIESSVLADHHSQVDISRPNECSRHLLIHIGNNDQVTNALSESILQGLTVRDDGDDCVLPGDKYPCWQCFKGEGASVKFRVPLVSSHELKGMTVCCEYHPSGDLGNVDIDSFITMVITNYTKTTTLLYGRGVVTSFEEANWKEIISNLDSNDQVHIIVLFGNGFIVKRTAVYLKYDESFDELIEDPPSSSRELHRDDKNHDFKLSEPKRQRFLYILKVIRSGWLDRQPDLTAICSAPRNRFWVEPDQTGEKRRLRRNPGRGFSKPDGLLEAGIRKLLDVTDLEPHSPTSHGQRPARRLREDENPSGLPLPVNDVSADNGVGDESSISYCDNPACKAALSEADVFCKRCSCCICHNYDEHKDPSLWLNCSSEPPFVGVSCCSSCHLECALEHDNSGIAEDGRRPKLDGSFYCISCGKVNDLLGREGREGF 1954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00028 1954 Gene3D Ribonuclease Inhibitor 474 674 IPR032675 -
Pral4093g00028 1954 Gene3D Ribonuclease Inhibitor 1205 1390 IPR032675 -
Pral4093g00028 1954 FunFam Disease resistance protein (TIR-NBS-LRR class) 679 850 - -
Pral4093g00028 1954 SUPERFAMILY "Winged helix" DNA-binding domain 1091 1197 IPR036390 -
Pral4093g00028 1954 SUPERFAMILY "Winged helix" DNA-binding domain 361 467 IPR036390 -
Pral4093g00028 1954 CDD PHD_VIN3_plant 1874 1939 - -
Pral4093g00028 1954 Gene3D - 1 38 IPR035897 -
Pral4093g00028 1954 MobiDBLite consensus disorder prediction 1805 1841 - -
Pral4093g00028 1954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 854 1115 IPR027417 -
Pral4093g00028 1954 PRINTS Disease resistance protein signature 1292 1308 - -
Pral4093g00028 1954 PRINTS Disease resistance protein signature 960 974 - -
Pral4093g00028 1954 PRINTS Disease resistance protein signature 883 898 - -
Pral4093g00028 1954 PRINTS Disease resistance protein signature 1055 1069 - -
Pral4093g00028 1954 Gene3D - 852 1012 IPR027417 -
Pral4093g00028 1954 Gene3D - 680 851 IPR035897 -
Pral4093g00028 1954 SUPERFAMILY L domain-like 444 677 - -
Pral4093g00028 1954 SUPERFAMILY Toll/Interleukin receptor TIR domain 680 825 IPR035897 -
Pral4093g00028 1954 Gene3D - 39 119 IPR035897 -
Pral4093g00028 1954 Pfam PHD - plant homeodomain finger protein 1854 1947 IPR032881 -
Pral4093g00028 1954 Gene3D - 1020 1104 IPR042197 -
Pral4093g00028 1954 Gene3D - 290 374 IPR042197 -
Pral4093g00028 1954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 385 IPR027417 -
Pral4093g00028 1954 SMART AAA_5 880 1022 IPR003593 GO:0016887
Pral4093g00028 1954 SMART AAA_5 150 290 IPR003593 GO:0016887
Pral4093g00028 1954 Gene3D - 120 285 IPR027417 -
Pral4093g00028 1954 SUPERFAMILY L domain-like 1174 1489 - -
Pral4093g00028 1954 Pfam NB-ARC domain 150 365 IPR002182 GO:0043531
Pral4093g00028 1954 Pfam NB-ARC domain 879 1094 IPR002182 GO:0043531
Pral4093g00028 1954 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 96 IPR035897 -
Pral4093g00028 1954 Pfam TIR domain 683 847 IPR000157 GO:0007165
Pral4093g00028 1954 Pfam TIR domain 39 108 IPR000157 GO:0007165
Pral4093g00028 1954 ProSiteProfiles TIR domain profile. 681 848 IPR000157 GO:0007165
Pral4093g00028 1954 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 683 1491 IPR044974 GO:0006952
Pral4093g00028 1954 SMART till_3 682 822 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00028 Pral-Chr4093 346434 453610 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00028 14 679 WRKY Transcription Factor Family AT4G12020 28.892 1.11e-62 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00028 - - mtr:11422497 1731.84