Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00027 ATGCTCAATTCCAGGAATGAAAGTGAGGATATCAAGAATATTGTTGAGCATGTTTGTGAAATATTGGACAAGAAAGACTTGTTCGTTGCTAACCATCCTGTAGGAGTAAACTCTCGCGTGCAAGATTTGATCAAAATGTCAGAAAGCCATCCACCAAATGATGTTCTCCTCCTTGGGATCTGGGGGATGGGTGGTATAGGCAAAACAATAATTGCCAAGGCCATTTACAATGAAATTGGTGGAAATTTTGAGAGCAGAAGTTTTCTTTCAAATATTAGGGAGGTCTGGGAGCAAGATCATGGTCCAGTTTACTTACAACAGCAACTTCTTTCACAAATCTGTAAAACAACAAAGATGATAATACCTTGCATTGAATCAGGAAAACACATACTAAGAGAAAGACTTCGCCAAAAGCAAGCACTTGTAGTGCTCGATGATGTGGATGAGGTGGAACAACTGAATGCTTTATCTGGAAATGGTAAATGGTTTGGTCCAGGAAGTAGAATAATTATCACAACCAGAGATGAACATTTACTAAGATTTCTTAACGTGGATGTGGACCATGTATATAGAGTAAAGAATATGGACAAAAATGAATCTATTGAGCTTTTCAGTTGGCATGCGTTTAGGCAGCCGAGTCCTAGAGAAGGATTTGTTGAACTTTCTAGAAATGTAGTTGCTTATTCTGGAGGACTACCACTAGCTCTTGAAATTCTTGGCTGCTATTTGCTTGATAGGGAAGTGACAGAGTGGAAGAGTGTACTGGACAAACTAAAAAAAATCCCAAATCGTCAGATACAAAAGAAGCTACAAATAAGCTTTGATGGTTTAAATGATGAGAGAGAGAAGGAAATCTTCCTTGACATATCTTGCTTCTTTATTGGAATGGATAGGAATGATGTCACACAGATATTGAATGCCAGTGGATTGTTTGCAGACATTGGAATTAGTGTCCTTGTGGAGAAAAGCCTCGTGACCATTGATGAGAAGAACAAGCTTGGTATGCATGATTTGTTACGAGATATGGGAAGAGAAATAATCCGTGAAAAGTCACCGAAAGAATTTGGAAAGCGTAGTAGGTTATGGTCTCATGAGGATGTGATCGATGTGTTATCAAAACATATAGGTACAGAATCTGTGGAGGGGCTAGCTTTGAATCTGTCACAAGATGGTAAAGTTTATTTTTTAACCAAAGCATTTAAGAAGATGAAGACACTCAGACTGCTTCGTCTTGCTAATGTGGAACTTGATGGAGACTATAGACACATTAGTAGAGATCTCAAATGGCTCTGTTGGCACAAATTTCCTTTCAAATACATCCCTGCCAACTTCCTTCAAAATAATTTAGTCGCTATTGAATTAAAATACAGCAGTCTGAGACTCTGGAGGGAGCCCCAACTACCAAATCTTGAAAAGTTGATCCTCAAAGATTGTCCAAGTTTGGCCACGATACATAATACAATAGGGCATCTTGGTAAAATTCATCTAATAAATTTGAAGGATTGTACTGGCCTTTGTAGTCTCCCAAGAAGCATTTATGAATTGAAGTGCTTAAAAACTCTCATTCTTTCTGGTTGTTTGATGATAAAAAAGTTAGAGGAAGATATAGAGCAGATGGATTCTTTGTCAACTCTAATTGCAGATAACACAGCAATAACTGAAGTACCCATTTCCTTGGTGAGATCAAAAAGCATTGGCTATATATCTGTTTGTGGTTACCAAGGGCTTGCACGTCATGTGTTTCCGTCCCTCATTTGGTCAAGGATGTCTCCAACGAACAATCCTCTTTCTCTTATTCCGAGATATGCTTGCACGCCATCTTCAATTTTCTTATGTGAAAACAATTGCAGTATCTCATGTCCTTCATCGATTCATGACAACCTTCTAAAGCCCCAAAGCCTTTCATTGGAATGCACATCAGAGAATGAAGCTAAGGTAAATCGAGATGCTACAAAAATCTTGGATTCCTTGTGTGCCATAAGTAGCAGGGACATGGCAAAGACACCAAATACTTCAAAAATCTTGGAGATTGAATCTTCTGTGTTGGCTGATCATCATAGTCAAGTTGACATCTCAAGGCCAAACGAATGTTTGAGACATCTTCTAATTCATATTGGAAACAATGACCAAGTCACTAATGCTCTTTCAGAAAGTATTTTACAGGGACTAACTGTCAGAGATGATGGTGATGATTGTGTCCTCCCGGGTGACAAATATCCCTATTGGCAATGCTTCAAGGGTGAAGGAGCTTCTGTAAAATTTAAAGTGCCTCTAGTTAGTAGCCATGAGTTAAAAGGGATGACTGTTTGCTGTGAATATCACCCCTCAGGTGATTTGGGAAATGTGGATATTGACTCTTTCATTACCATGGTGATCACAAACTATACAAAGACAACGACACTACTCTATGGGCGAGGCGTAGTGACTTCCTTTGAAGAAGCAAATTGGAAGGAAATAATATCAAATCTGGACTCTAATGAACAAGTGCATATCATTATACTTTTTGGTAATGGGTTCATTGTGAAAAGAACAGCAATTTACTTGAAATATGACGAGTCATTTGATGAACTGATAGAGGATCCACCATCATCAAGTAGAGAATTGCATAGGGATGATAAAAACCATGATTTCAAGCTGTCGGAGGCTAAGCGTCAGAGAGGAGAGCCTAGGAAAGGGTATTGGTTCGAAAGAGCTGCTGCTTTGAAATTATGGAAGAAAAGCAAATCAAGAAGCAGCAGTTTAGCAGACATTCAGAAGCCTGAAGACCTTAACATTGGGAAGAGGTGGTTTCATTTTTCAATGGATGTGACGGACCTTGAGCCACATTCTTCTACTTCACATGGACAGAGACCTGCTAGGAGGCTGAGAGAAGATGAGAATCCGTCTGGATTACCTCTTCCGGTAAATGATGTTTCTGCCAACAATGGAGTTGGAGATGAAAGTAGTATTTCCTACTGCGAAAACCCAGCTTGCAAAGCTGCCCTAAGTGAAGCAGATGTGTTCTGTAAAAGATGCTCATGCTGCATTTGTCATAACTATGATGAAAACAGAGATCCTAGCCTTTGGTTAAACTGTAGCTCTGAGCCTCCATTTGTTGGTGTTTCGTGTGGCTCGTCATGTCATCTTGAGTGTGCTTTAGAGCATGATAATTCTGGCATTGCCGAAGATGGGAGACGTCCCAAGCTTGATGGAAGCTTCTACTGCATCTCATGTGGGAAAGTGAATGATTTGCTCGGGTGCTGGAGAAAGCAGCTGATTATTGCAAAGGGTACTAGGCGCGTCGACGTGCTTTGCCATTGTGTTTCCTTGTGCCAAAGAATGTTACAAGGGACTGAAAAGTATACAGAACTTCATGAAAATGTTAATGAGGCAGTGACGAAACTTGAGCCTGAATTAGGCCCACTAGCTCATTCACCAGTGAAGATTGGTAGGGGCATTGTGCACAGACTTTCTTCAGGGCCAGAGGTTCAGAAACCCTGTGGTGCGGCTTCTTCTATGCCTGCGCGAAGGTAG 3513 0.4031 MLNSRNESEDIKNIVEHVCEILDKKDLFVANHPVGVNSRVQDLIKMSESHPPNDVLLLGIWGMGGIGKTIIAKAIYNEIGGNFESRSFLSNIREVWEQDHGPVYLQQQLLSQICKTTKMIIPCIESGKHILRERLRQKQALVVLDDVDEVEQLNALSGNGKWFGPGSRIIITTRDEHLLRFLNVDVDHVYRVKNMDKNESIELFSWHAFRQPSPREGFVELSRNVVAYSGGLPLALEILGCYLLDREVTEWKSVLDKLKKIPNRQIQKKLQISFDGLNDEREKEIFLDISCFFIGMDRNDVTQILNASGLFADIGISVLVEKSLVTIDEKNKLGMHDLLRDMGREIIREKSPKEFGKRSRLWSHEDVIDVLSKHIGTESVEGLALNLSQDGKVYFLTKAFKKMKTLRLLRLANVELDGDYRHISRDLKWLCWHKFPFKYIPANFLQNNLVAIELKYSSLRLWREPQLPNLEKLILKDCPSLATIHNTIGHLGKIHLINLKDCTGLCSLPRSIYELKCLKTLILSGCLMIKKLEEDIEQMDSLSTLIADNTAITEVPISLVRSKSIGYISVCGYQGLARHVFPSLIWSRMSPTNNPLSLIPRYACTPSSIFLCENNCSISCPSSIHDNLLKPQSLSLECTSENEAKVNRDATKILDSLCAISSRDMAKTPNTSKILEIESSVLADHHSQVDISRPNECLRHLLIHIGNNDQVTNALSESILQGLTVRDDGDDCVLPGDKYPYWQCFKGEGASVKFKVPLVSSHELKGMTVCCEYHPSGDLGNVDIDSFITMVITNYTKTTTLLYGRGVVTSFEEANWKEIISNLDSNEQVHIIILFGNGFIVKRTAIYLKYDESFDELIEDPPSSSRELHRDDKNHDFKLSEAKRQRGEPRKGYWFERAAALKLWKKSKSRSSSLADIQKPEDLNIGKRWFHFSMDVTDLEPHSSTSHGQRPARRLREDENPSGLPLPVNDVSANNGVGDESSISYCENPACKAALSEADVFCKRCSCCICHNYDENRDPSLWLNCSSEPPFVGVSCGSSCHLECALEHDNSGIAEDGRRPKLDGSFYCISCGKVNDLLGCWRKQLIIAKGTRRVDVLCHCVSLCQRMLQGTEKYTELHENVNEAVTKLEPELGPLAHSPVKIGRGIVHRLSSGPEVQKPCGAASSMPARR 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00027 1170 Gene3D Ribonuclease Inhibitor 383 543 IPR032675 -
Pral4093g00027 1170 Gene3D - 15 189 IPR027417 -
Pral4093g00027 1170 MobiDBLite consensus disorder prediction 1151 1170 - -
Pral4093g00027 1170 CDD PHD_VIN3_plant 1006 1071 - -
Pral4093g00027 1170 Pfam PHD - plant homeodomain finger protein 986 1105 IPR032881 -
Pral4093g00027 1170 SUPERFAMILY "Winged helix" DNA-binding domain 265 371 IPR036390 -
Pral4093g00027 1170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 641 IPR044974 GO:0006952
Pral4093g00027 1170 PRINTS Disease resistance protein signature 57 72 - -
Pral4093g00027 1170 PRINTS Disease resistance protein signature 465 481 - -
Pral4093g00027 1170 PRINTS Disease resistance protein signature 229 243 - -
Pral4093g00027 1170 PRINTS Disease resistance protein signature 134 148 - -
Pral4093g00027 1170 MobiDBLite consensus disorder prediction 940 974 - -
Pral4093g00027 1170 Pfam NB-ARC domain 53 266 IPR002182 GO:0043531
Pral4093g00027 1170 SUPERFAMILY L domain-like 348 637 - -
Pral4093g00027 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 289 IPR027417 -
Pral4093g00027 1170 Gene3D - 194 278 IPR042197 -
Pral4093g00027 1170 MobiDBLite consensus disorder prediction 860 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00027 Pral-Chr4093 332065 345601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00027 34 635 WRKY Transcription Factor Family AT5G45050 31.455 4.96e-71 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00027 - - pcin:129288835 1191.79