Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00026 ATGATACAATTGGGGGCAGTTTTGAGAGTAGGTGTTTCCTTGAAAATATACAGTGTACAAGGGAAAGCTAATGGTCTTTTTTGTTTGCAAGAACAGCTTCTTTCAGATGTTTCACATGCAAAACATGAGAAGATAGTTGATATTGAAAGGGGAGTTAGTCAAATGAAAATAGCACTACACAATAAAAGGGCGCTTATAGTACTCGATGATATAAGCAAAACTGACCAACTGACGGCATTTTGCGGAAACAGTGAATGGTTTGGTTGTGGGAGTATGATACTCATTACAACAAGAAATAAGCACATACTCGATGAACTCAATGAGAAATATTTCTTTGAAATGAAAAGAATTGACAACAGTAAATCTCTTGAGCTTTTCAGCTGGAACGCTTTTAAGCATTTGAGTCATAGAGATGATTTTGTTAAGCTTGCAAAAAGTATAGTTACTTATTGTGAAGGATTGTCGCTGGTTCTTGAAGTGCTTGGCTCTCTTTTGTTCAATAAGACAAAACCAGAGTTAAGAAGTGTATCGACGAAATTGAAAGGCATTCCCACAGGTCAAATGCAGGAGAAGCTCAAAATAAGCTGCGAGTATCTGGATGGTTCAGTGAAAGATTACTTGTTCTTTAATATCGCTTGCTTTTATGTGGGTGTGGAAAAACAGGATGTCATGCACAAATTAAATGGCTTCAAAATTCCTACAGAAAATGGAATAAGAATGCTCATTGAGCATAGCCTTGTAAAAGTTGACATGAATAATAAATTGGGGATGCATGAGTTGCTGCAAGAGATTGGAAAAAGCATCAATCCTAAGAAGTCAAAATCCAAATATGTCTACGATGTGTTCTTGAGTTTTAGGGGTGAAGATACATGCAAATCTTTTACGAGTCATCTTCACATCACATTAAAAAATGCAGGCATTGAAACTTTCATGGATAATGGGATTAGAAGGGGAGAAAATATCTCATCCACGCTAAGACAAGCAATTGAAAATTCCAGAATGTCAATCATTATTTTTTCAATCAATTATGCTGGCTCTAGATGGTGCTTGCAAGAATTGGAGAAAATCATGAAGTGTCACAGAACTACTGGTCAAGAGGTCTTGCTTATATTCTACGGTGTCCAGCTATGA 1131 0.3652 MIQLGAVLRVGVSLKIYSVQGKANGLFCLQEQLLSDVSHAKHEKIVDIERGVSQMKIALHNKRALIVLDDISKTDQLTAFCGNSEWFGCGSMILITTRNKHILDELNEKYFFEMKRIDNSKSLELFSWNAFKHLSHRDDFVKLAKSIVTYCEGLSLVLEVLGSLLFNKTKPELRSVSTKLKGIPTGQMQEKLKISCEYLDGSVKDYLFFNIACFYVGVEKQDVMHKLNGFKIPTENGIRMLIEHSLVKVDMNNKLGMHELLQEIGKSINPKKSKSKYVYDVFLSFRGEDTCKSFTSHLHITLKNAGIETFMDNGIRRGENISSTLRQAIENSRMSIIIFSINYAGSRWCLQELEKIMKCHRTTGQEVLLIFYGVQL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00026 376 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 272 IPR044974 GO:0006952
Pral4093g00026 376 Gene3D - 116 200 IPR042197 -
Pral4093g00026 376 Gene3D - 272 376 IPR035897 -
Pral4093g00026 376 SMART till_3 278 376 IPR000157 GO:0007165
Pral4093g00026 376 Gene3D - 12 111 IPR027417 -
Pral4093g00026 376 Pfam TIR domain 279 374 IPR000157 GO:0007165
Pral4093g00026 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 207 IPR027417 -
Pral4093g00026 376 PRINTS Disease resistance protein signature 151 165 - -
Pral4093g00026 376 PRINTS Disease resistance protein signature 58 72 - -
Pral4093g00026 376 ProSiteProfiles TIR domain profile. 277 376 IPR000157 GO:0007165
Pral4093g00026 376 Pfam NB-ARC domain 19 201 IPR002182 GO:0043531
Pral4093g00026 376 SUPERFAMILY Toll/Interleukin receptor TIR domain 271 373 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00026 Pral-Chr4093 306903 308033 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00026 17 268 WRKY Transcription Factor Family AT5G45050 29.528 4.89e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00026 - - pcin:129288182 451.825