Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00021 ATGTCTTCCTTTGCTTCTTCGTCGTCTAATCCGGAATGCACTTTTGAGTACGACGTATTTTTAACTATCAGCCATCCCAAACATAATGTGAAAACCTGCTTGGAAAAATATTTTAGGGATGTTGGAATCAAACCTTTGATAGATGATCAGATGGAGGAGTTTCTCGTGCACGACATAGTGAAGTGCAGAATGATTGTGGTTGTTTTCACGCCACAGTTCCTTGAGTCCGACATGTTTCTCAAGAGAATTGTGACTATAAGGAAGTGTCAAAAACTTGCGCAAATAAAAGTTTCGCCTGTGTTCTGTGGATTGAGCGAGGAACAAGTACGTGAGCAGTTGGAGCGTGTGGATCAGAGAAGATTAGATAGTTGGGATTTGGATATGGAGTCAGGAGGATTCGTTGCTGAAGCTGCTTCGCTTTTGGATTCAGCAACAGCCATCGCTGAAGCTGCTTCGTTATCTGATTTGGGGGATAAAATCAGCAATCTTATTGCAAAGTTAAACAAATCCTTGTTTCATGAGGAATTGTTTCACGACCTTCAGCAACATCAAGCAGGGTTACAACGTCATCTTAAGGAATTGCTTGATATCTTGAGGCAGGCACACCTTACTTCTGAAGATACGTTCATAGTTGGAATTTGGGGTGACGGAGGTATTGGTAAAACTACAATTGCAAAAACTTTCTATGATAAAATTGGCAGTAATTTTGAGGGTAAAAGTTTCCTTGCAAATATCAAGGATGTATGGGATAACCGTAATGGTAGAGTTCTCAAAAAGCAGCTTATTTCAGATATTTCTGAAGTTGAAATTGATGAGAAAAAAGATGTCCTAGTGATTCATGAACAAATGATGAAAGTACTCCATGGAAAAAGAGTCCTAGTAGTACTTGATAACGTAAATAGTGGATACCAGCTCATGGAATTGTGTGGAAATATGAGGTGGTTTGGTAGAGGGAGTTTGATATTCATTACTGCAAGGAATAAGGATGTCTTTAAAAATTTTGTTGATGTATCATATGAAATGAAAAGGTTAGATAGTGATGAGTCCATTAAGCTCTTCAACTGGCATGCATTCAAGAGAGCTACTCCAAAGGATGATTTTGAGGATCTTTCAAATAAAGTCGTTACTTTTTGTGAAGGACTGCCATTGCTTCTTGAAGTTATTGGCAGTATTTTGCATAATAGGACATTACCGGAGTGCCAAGGTGTATTGCTTGAATTGGATCAAATTCCTTATGGTCAAATGCAAAGAAAGCTCTATGTTGGCATTGAATTTCTAACAGATTTAGAAAAAGATTTGTTCTTTAATATAGCTTCTTTTTATGTGGGTCAGAGTAAAACCTATGTTACAAAGTTGTTAAAAGACTTAAGATTTCCTGTGGAAGTGGGAATGCCTGTACTCTTTGAGCGTAACCTTGTAAAGGTCATAGATGACAACCTTTATGTTCATGACTTGTTTCAAGAGATAGTAAGAAGTGGTCCTGACAAGCCAAAGCTCAAATATAGTTATGATGTGTTCTTGAGTTTTAGAGGTGAAGATACACGCAAATCCTTTGCTACTCATCTTTACTCTGCTCTAAAGCAAGCAGGTATTGACATCTACATGGATGAAGAACGAATTGAAAGAGGAGAAGGTATTTCATCTTCACTTCTGCAAGCAATTGAAAGTTCTAAAATTTCAATAATTATACTATCAAAGAATTATGCTGGCTCTAGTTGGTGCTTGCAAGAATTAAAGAAAATCATGGAGTGTTACAAAACAACTTATCAAGAGGTGTTACCAATATTTTTTGATGTGCGACCATCTGAAGTACGGAAGCAAACAAATTCTTTTGGAAAAGCATGGGAAAGACTTGTCAAGAGAACTTTGGGTAATGAAGTGGAGAACTGGAAAAGTAATTCAAAGAGAGCCCTCATAGAAGTTGCCAATTTATCTGGGTGGGATATGCATAACTACAGAACTGAAACTGAGCTGATTGATGAAGTCATTGAAACTATTACAAAGAAATTGGGTGACAATAAAAGCCTATTTGTTGCTCGCCATCCAGTGGGTTTGAAGTCTCGTATGCAAGCCATCCTTCAATTGCTACGAAGCAAAACAAAAGATGTTATCATCGCAGGGATCTGGGGAATGGGGGGAATTGGTAAGACAACGATTGCTAAAGCCATTTACAATCAAGTTGGTCAAAGTTTTGAAGGAAAGTGTTTCCTTGCAAATGTTAGAGAAGTTTGGAAACAAGATAATGGTCAAGTTTACTTGCAAGAACAACTGCTTTCAGACATTTTCAAATCAAGAAGAAGGGCACTACCAAATGTAGAAATGGGGAAAACTCTATTAGAAGAAATGCTTTGTAAGAAAAAAGTACTTGTTGTACTTGATGATGTCAACAATGAAGACCAACTCAAAGCATTATGTGGAAGTCGGGAATGGTTTGGCCAAGGTAGTAGAATCATAATTACAACTCGAGATGAACGTTTGCTCAAGATCCTTAAAGTAATTCATGTATATACCATGAAAGAATTGGATGACAATGAATCTCTTGAACTTTTTAGTTGGCATGCATTTAAACAAGCAACCCCTGAACAGGATTTCATTGAAATTTCAAGAAGGGTAGTTTTTTACTCTGGAGGGTTGCCACTGGCTCTAGAAATTCTTGGCTCTCACTTGTTTGATAGAGAAATAGAATTTTGGGAAGATGTTTTGAAGAAATTACAGCAAATTCCGGATGGTCAAATACATGAAAAGTTGAAAATAAGTTATGATGGTTTGAGTGACAATACAGAGAAAGATGTATTTCTTGACATATGTTGTTTTTTGGTTGGAAAGGACAGAAGCTATGCTGTGGAAATATTAAATGGTTGTAGACTTCATGCAGAAATTGGAATTAGTCGTCTAATAGAATTGAGTCTTGTAAAGGTTGGCAACAAAAATAAGCTTGAAATGCATGACTTATTACGTGATATGGGAAGAGAAATAATTCGTGCGGTGGCACCAGATGAGCCTGAGAACCGGACTAGATTATGGTATCGTGATGATGTGCTGGATGTTTTGAGAGAGAGCACTGGAACAAAAGCTATTAAAGGACTAGCTTTAAACATGCCAAAGAACGATTCAGTATCCTGCAGTGCAAAAGCATTTAAGGAGATGAAGAGGCTTTGTTTGCTACAGCTTAGTCATGTACAACTTGATGGAGACTATAATTATCTATCAACAGAGTTGAGATGGCTTTGTTGGCATGGATTTACCCGGGAGAACATGCCAATGAACTTGTGCCTGCAAAAAATAGTTGCCGTTGACTTAAAGTGGAGTAATCTCATAAAAGTATGGGAGAACTGTCAGTTGTTGGAGAAGTTGAAAATTCTAAATCTGAGTCATTCTCATTACTTGATTGAAACGCCAAAGTTTTCAAAGTTACCATATCTTGAAAAGCTAGTACTCAAAGATTGTTCACGTCTGTCTACAATTCACCCTTCCATTGGTAATCTTAAATATATTATCTTGTTAAATCTAAAGGACTGCAAAAGCCTCAAACGCCTCCCACGCAGTGTATATAACTTGATATCCTTGAAGACCTTAAATATTTGTGGGTGTTCAAAGATTGAAAAGCTAGGAGAAGACATTGGGAAGATGGATTCTTTGACAACTTTGGTTGCAAATCAAACTGCTATAACGCAAGTTCCATTCTCGTTAGTGAGATTGAAAAGCATTAAATGTGTGTCTTTATGTGGTTATGAAGGATCATCGCGAGATGTATTTCCATCTCTTGTTTTGTCTTGGATGTCACCATCACATCGTTCAAGGTCCTTGTCTCGAGCATTTCAGATCTTGCCATCTCTAACTAGGGGTATATCACATCTATTTGCTAGAAGCAATGATAGTTTTGAACCAAGGCAAAGTACAGCTCAAGCTTTATGTCAAAAAGCTCCAACATTAATTGAATTTCATGCACAAGTTCCCATTAAAAGCTTGGAAACATTTATCAGTTCTCTAACTATTCGTGTCAGCGGCTTCAACAGAGTTGTTGATACACTTTTAAAGAGTATTTCACAGGGATGCAATGATGATGGGCTTGACTTTTCTCTTCCAATGGACAATTATCCGGATTGGCTAGTTTTTGTAAATGAAGGATCATCAGTATCATTTAAAGTTCCTCAAATTGTTGGCCGTTGCTTGAAAGGAGTGGTCCTCCACATTATCTATTTACCTCTTCAAGATAGCATGTCATCTGTGTATCCCATCGGTGTTATGATAAAGAATTTCACCAAAACTACCATAGATTTCTACAAGCGAGATGCTGGAACGGGAACCACTTCTGCTGATGAAGAATGGCAGAAGATAACATCTAATTTGGAGCCTGGAGATGACGTGAAAGTTAAAGTTGAATTTGCACATAAATATAGTATGAAGAAGACTGCAATATATCTTATATATGTTGAAGAAACTAATGAACTGAGCATCACGGAGTTAAGTTAA 4473 0.3731 MSSFASSSSNPECTFEYDVFLTISHPKHNVKTCLEKYFRDVGIKPLIDDQMEEFLVHDIVKCRMIVVVFTPQFLESDMFLKRIVTIRKCQKLAQIKVSPVFCGLSEEQVREQLERVDQRRLDSWDLDMESGGFVAEAASLLDSATAIAEAASLSDLGDKISNLIAKLNKSLFHEELFHDLQQHQAGLQRHLKELLDILRQAHLTSEDTFIVGIWGDGGIGKTTIAKTFYDKIGSNFEGKSFLANIKDVWDNRNGRVLKKQLISDISEVEIDEKKDVLVIHEQMMKVLHGKRVLVVLDNVNSGYQLMELCGNMRWFGRGSLIFITARNKDVFKNFVDVSYEMKRLDSDESIKLFNWHAFKRATPKDDFEDLSNKVVTFCEGLPLLLEVIGSILHNRTLPECQGVLLELDQIPYGQMQRKLYVGIEFLTDLEKDLFFNIASFYVGQSKTYVTKLLKDLRFPVEVGMPVLFERNLVKVIDDNLYVHDLFQEIVRSGPDKPKLKYSYDVFLSFRGEDTRKSFATHLYSALKQAGIDIYMDEERIERGEGISSSLLQAIESSKISIIILSKNYAGSSWCLQELKKIMECYKTTYQEVLPIFFDVRPSEVRKQTNSFGKAWERLVKRTLGNEVENWKSNSKRALIEVANLSGWDMHNYRTETELIDEVIETITKKLGDNKSLFVARHPVGLKSRMQAILQLLRSKTKDVIIAGIWGMGGIGKTTIAKAIYNQVGQSFEGKCFLANVREVWKQDNGQVYLQEQLLSDIFKSRRRALPNVEMGKTLLEEMLCKKKVLVVLDDVNNEDQLKALCGSREWFGQGSRIIITTRDERLLKILKVIHVYTMKELDDNESLELFSWHAFKQATPEQDFIEISRRVVFYSGGLPLALEILGSHLFDREIEFWEDVLKKLQQIPDGQIHEKLKISYDGLSDNTEKDVFLDICCFLVGKDRSYAVEILNGCRLHAEIGISRLIELSLVKVGNKNKLEMHDLLRDMGREIIRAVAPDEPENRTRLWYRDDVLDVLRESTGTKAIKGLALNMPKNDSVSCSAKAFKEMKRLCLLQLSHVQLDGDYNYLSTELRWLCWHGFTRENMPMNLCLQKIVAVDLKWSNLIKVWENCQLLEKLKILNLSHSHYLIETPKFSKLPYLEKLVLKDCSRLSTIHPSIGNLKYIILLNLKDCKSLKRLPRSVYNLISLKTLNICGCSKIEKLGEDIGKMDSLTTLVANQTAITQVPFSLVRLKSIKCVSLCGYEGSSRDVFPSLVLSWMSPSHRSRSLSRAFQILPSLTRGISHLFARSNDSFEPRQSTAQALCQKAPTLIEFHAQVPIKSLETFISSLTIRVSGFNRVVDTLLKSISQGCNDDGLDFSLPMDNYPDWLVFVNEGSSVSFKVPQIVGRCLKGVVLHIIYLPLQDSMSSVYPIGVMIKNFTKTTIDFYKRDAGTGTTSADEEWQKITSNLEPGDDVKVKVEFAHKYSMKKTAIYLIYVEETNELSITELS 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00021 1490 Gene3D Ribonuclease Inhibitor 1022 1286 IPR032675 -
Pral4093g00021 1490 ProSiteProfiles TIR domain profile. 15 145 IPR000157 GO:0007165
Pral4093g00021 1490 PRINTS Disease resistance protein signature 782 796 - -
Pral4093g00021 1490 PRINTS Disease resistance protein signature 705 720 - -
Pral4093g00021 1490 PRINTS Disease resistance protein signature 875 889 - -
Pral4093g00021 1490 PRINTS Disease resistance protein signature 1113 1129 - -
Pral4093g00021 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 674 935 IPR027417 -
Pral4093g00021 1490 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 503 1227 IPR044974 GO:0006952
Pral4093g00021 1490 SMART AAA_5 702 839 IPR003593 GO:0016887
Pral4093g00021 1490 SMART AAA_5 207 345 IPR003593 GO:0016887
Pral4093g00021 1490 Gene3D - 166 337 IPR027417 -
Pral4093g00021 1490 FunFam Disease resistance protein (TIR-NBS-LRR class) 499 672 - -
Pral4093g00021 1490 SMART till_3 502 644 IPR000157 GO:0007165
Pral4093g00021 1490 SUPERFAMILY L domain-like 981 1280 - -
Pral4093g00021 1490 ProSiteProfiles TIR domain profile. 501 670 IPR000157 GO:0007165
Pral4093g00021 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 435 IPR027417 -
Pral4093g00021 1490 Pfam TIR domain 503 672 IPR000157 GO:0007165
Pral4093g00021 1490 Pfam TIR domain 17 113 IPR000157 GO:0007165
Pral4093g00021 1490 SUPERFAMILY Toll/Interleukin receptor TIR domain 499 646 IPR035897 -
Pral4093g00021 1490 Gene3D - 498 673 IPR035897 -
Pral4093g00021 1490 Pfam NB-ARC domain 204 399 IPR002182 GO:0043531
Pral4093g00021 1490 Pfam NB-ARC domain 689 910 IPR002182 GO:0043531
Pral4093g00021 1490 Gene3D - 674 835 IPR027417 -
Pral4093g00021 1490 Gene3D - 1 127 IPR035897 -
Pral4093g00021 1490 Gene3D - 840 924 IPR042197 -
Pral4093g00021 1490 Gene3D - 343 425 IPR042197 -
Pral4093g00021 1490 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 117 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00021 Pral-Chr4093 157033 165149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00021 56 497 WRKY Transcription Factor Family AT4G12020 25.390 3.96e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00021 - - pcin:129288830 1786.93