Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00010 ATGTTTTTCACAGATCCTGTGCTTCTACACTATCACCAGACTCAGCTTCCCAAAATGATCCCTAATCATTCTACTTTTCAATCAGTTCAACAAGTTCTCACGAATGGCTTCTTCACCGGCGATGACACTACATTGAATCTTGACCGTGACATGGCTTTGCCAGAGCAGGGTGTTATCAGCTCCACTGGTGCAGTGTTTCCCGGCGAGGATGACAACGCTGTGAAACCAGGTGGTGGTGATGACAGAGTAAATGGTAATAACGACGCAGTATCTGTGGCGCGTGAGGGGAACGGGCCGCCAAGACGGAGGAATTACCGAGGCGTGAGGTGGCGGCCTTGGGGGAAGTTTGCGGCTGAGATCCGGAACCCAAAGAGAAACGGTGCGAGGACATGGTTGGGAACTTATAAGAAGAAAGAGGATGCGGCTCTGGCTTATGATAGAGCCGCTTTCAAGATGAGAGGCAGAAAAGCCAAGGGTGCTAGTAGCTCCACTGGCCCAGTGTTTCCTAGCGAGAATGACAATGCTGTGAAACCAGGTGTTGGTGATGATAGAGTACACGGTAATAACAAAGCAGGATCTGTGGCGTGTGAGGGGATGAAGGAATTACCGAGGCGTGCGGCGGCGGCGGCCGTGGGGAAAGTTTGCGGCTGA 651 0.5192 MFFTDPVLLHYHQTQLPKMIPNHSTFQSVQQVLTNGFFTGDDTTLNLDRDMALPEQGVISSTGAVFPGEDDNAVKPGGGDDRVNGNNDAVSVAREGNGPPRRRNYRGVRWRPWGKFAAEIRNPKRNGARTWLGTYKKKEDAALAYDRAAFKMRGRKAKGASSSTGPVFPSENDNAVKPGVGDDRVHGNNKAGSVACEGMKELPRRAAAAAVGKVCG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00010 216 Gene3D AP2/ERF domain 103 159 IPR036955 GO:0003700|GO:0006355
Pral4093g00010 216 MobiDBLite consensus disorder prediction 156 186 - -
Pral4093g00010 216 ProSiteProfiles AP2/ERF domain profile. 104 169 IPR001471 GO:0003700|GO:0006355
Pral4093g00010 216 CDD AP2 104 157 IPR001471 GO:0003700|GO:0006355
Pral4093g00010 216 MobiDBLite consensus disorder prediction 68 106 - -
Pral4093g00010 216 PRINTS Ethylene responsive element binding protein signature 128 144 IPR001471 GO:0003700|GO:0006355
Pral4093g00010 216 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Pral4093g00010 216 Pfam AP2 domain 104 154 IPR001471 GO:0003700|GO:0006355
Pral4093g00010 216 SMART rav1_2 104 163 IPR001471 GO:0003700|GO:0006355
Pral4093g00010 216 SUPERFAMILY DNA-binding domain 104 157 IPR016177 GO:0003677
Pral4093g00010 216 PANTHER DNA-BINDING DOMAIN 91 158 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00010 Pral-Chr4093 105443 110946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00010 96 158 AP2-EREBP Transcription Factor Family AT2G44840 70.769 1.30e-25 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral4093g00010 AP2 9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00010 K09286 - pcin:129296372 115.931