Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00006 ATGAACTCTAATCATTCTCCTTTCGAATCACTTCAACAATGCCTAGTCGAAGAAGACGATCCTTCCTCCTCCATGGCTCTCATGATTGGCTTCTTCACTGGCAGCAACCGTACTTCGAATCTGGACTGTGACATGGCTTTGCCGGAGCAGGGAGTTAGCAGCTCCACTGGCACGGTGTTTTCCGGCGAGAATGACAACGCTAGGAAACCAGGTGATGATGACAGAGTGAACGGTAGTGACGCCGGATCTGTGGCGCGTGAACGGAACGCGCCACCAAGATGGAGGAATTACCGAGGTGTGAGGCGGCGGCCTTGGGGGAAGTTCGCTGCTGAGATCCGACACCCGAATGGAAACGGTGCAAGGACGTGGCTGGGAACTTATGAGAAGGAAGAGGATGCAGCTCTGGCTTATGATAGAGCCGCTTTCCAGATGCGTGGTAGAAAAGCCAAGCTCAATTTTCCTCACCTCATTGCGTCGCAGCCACCGCCGGAGCCGGCGGCAAGAGTGGTGGCTGGACAGAAACGGCACAGCTCGCCGGAACCTTCGTCGCCGTCAAACAAGACATCTGAGGATGATGGATCTCAAGGGTCAAGCAAGAAGAAGAGCCTGACTGAACTATTGAACAAGTTAGCAGCAAATAGAAGCCATGTCAGATTGGGTTGA 663 0.5339 MNSNHSPFESLQQCLVEEDDPSSSMALMIGFFTGSNRTSNLDCDMALPEQGVSSSTGTVFSGENDNARKPGDDDRVNGSDAGSVARERNAPPRWRNYRGVRRRPWGKFAAEIRHPNGNGARTWLGTYEKEEDAALAYDRAAFQMRGRKAKLNFPHLIASQPPPEPAARVVAGQKRHSSPEPSSPSNKTSEDDGSQGSSKKKSLTELLNKLAANRSHVRLG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00006 220 ProSiteProfiles AP2/ERF domain profile. 96 154 IPR001471 GO:0003700|GO:0006355
Pral4093g00006 220 FunFam Ethylene-responsive transcription factor 2 95 155 - -
Pral4093g00006 220 SMART rav1_2 96 160 IPR001471 GO:0003700|GO:0006355
Pral4093g00006 220 CDD AP2 96 156 IPR001471 GO:0003700|GO:0006355
Pral4093g00006 220 SUPERFAMILY DNA-binding domain 96 155 IPR016177 GO:0003677
Pral4093g00006 220 MobiDBLite consensus disorder prediction 47 63 - -
Pral4093g00006 220 MobiDBLite consensus disorder prediction 47 95 - -
Pral4093g00006 220 Gene3D AP2/ERF domain 95 155 IPR036955 GO:0003700|GO:0006355
Pral4093g00006 220 MobiDBLite consensus disorder prediction 155 220 - -
Pral4093g00006 220 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Pral4093g00006 220 PRINTS Ethylene responsive element binding protein signature 136 156 IPR001471 GO:0003700|GO:0006355
Pral4093g00006 220 MobiDBLite consensus disorder prediction 176 192 - -
Pral4093g00006 220 PANTHER DNA-BINDING DOMAIN 69 201 IPR044808 GO:0003700|GO:0009873
Pral4093g00006 220 MobiDBLite consensus disorder prediction 66 81 - -
Pral4093g00006 220 Pfam AP2 domain 96 146 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00006 Pral-Chr4093 69204 69866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00006 97 190 AP2-EREBP Transcription Factor Family AT2G44840 69.149 3.61e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4093g00006 AP2 4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00006 K09286 - pcin:129296372 218.009