Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00002 ATGAACCCTAATTTTTCTCCTGTTGAATCAGTTCAACAATACCTTATTGAAGATGACCCTTCCCTCATGGCTCTCTTGAATGGCTTCTTCATGGACAACTCTACTGGGAATCTGAGCTATGGCGCTCCTTTGCCGGAGCTGCAGGGTGTTAGTAACACCAGTGGCACGGTGTTTTCTGGCGGGATTAATGATGACAACGTTATGAATCGGCCAGGTGGTTATGATAGGGCTGGTGGTAGTAACCCAGGATCTGTAGCGGGTGAAAAAAACGCGCCACATAGATGGAGGAATTACCAAGGCGTGAGGCGGCGACCGTGGGGGAAGTTTGCGGCAGAGATTTGGGAACCATGCAGGAATGGTGCGAGGACATGGCTGGGAACTTATGAGAGGGAGGAGGATGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGAAGGGTAGGAAATCAAACTTTTAA 459 0.488 MNPNFSPVESVQQYLIEDDPSLMALLNGFFMDNSTGNLSYGAPLPELQGVSNTSGTVFSGGINDDNVMNRPGGYDRAGGSNPGSVAGEKNAPHRWRNYQGVRRRPWGKFAAEIWEPCRNGARTWLGTYEREEDAALAYDRAAFKMKGRKSNF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00002 152 Gene3D AP2/ERF domain 96 152 IPR036955 GO:0003700|GO:0006355
Pral4093g00002 152 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Pral4093g00002 152 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Pral4093g00002 152 ProSiteProfiles AP2/ERF domain profile. 97 152 IPR001471 GO:0003700|GO:0006355
Pral4093g00002 152 SUPERFAMILY DNA-binding domain 98 149 IPR016177 GO:0003677
Pral4093g00002 152 CDD AP2 97 152 IPR001471 GO:0003700|GO:0006355
Pral4093g00002 152 SMART rav1_2 97 151 IPR001471 GO:0003700|GO:0006355
Pral4093g00002 152 PANTHER DNA-BINDING DOMAIN 84 149 IPR044808 GO:0003700|GO:0009873
Pral4093g00002 152 Pfam AP2 domain 97 147 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00002 Pral-Chr4093 21830 22288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00002 82 152 AP2-EREBP Transcription Factor Family AT2G44840 59.722 6.44e-24 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4093g00002 AP2 6.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00002 K09286 - pcin:129296372 119.012