Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4093g00001 ATGGAACCCAAGGATCGATTAAAGGGAATCCGTGTGAGTTACACTATCAGGGTCACCCAAATAGTGAAGAAGCTACAAAATAACACTATATCAACAAATTCGATGACTATTGCTGACTGGAAGACGGTGTCGTCTCTGAGCAACTCCACTGGTGCGGTGTTTTCCGGTGAGCACGAAGACACCGTGAAACCATCAGCAGGTGGTGATAGAGCCGATAATAATGTTAGTAGTAATGCAGATTCTGTGGCGCGTGAAAGGAACGCGCCGCCTAGATGGAGGAATTATAGAGGTGTGAGGCGTAGGCCGTGGGGGAAGTTTGCGGCTGAGATCCAGGACCCGAAGAGGAACGGAGCAAGAACGTGGTTAGGGACATATAAGAAGGAAGAGGATGGAGCATTGGCTTATGATATAGCTGCTTTTAAGATGAGGGGTAGAAAAGCCAAGCTCAATTTTCCACATCTCATTGGGTCGGAATCCCCGCCAGAGCTGCCGGAAAGAGTAGTCAGCGAGACGAAGCTGCAGTGCCACTGGCCGGAATCTTCATCGCCGTCAGGTTGTGCATCTGAGGATAACGGTGGATCTCAAGGGTCACGTAGTAAGAAGAAGAGGCTAACTACTCTATTGAATAAATTAGCAACAAATAGAAGCCAAATCAGAAGCTTGAAATAG 669 0.4783 MEPKDRLKGIRVSYTIRVTQIVKKLQNNTISTNSMTIADWKTVSSLSNSTGAVFSGEHEDTVKPSAGGDRADNNVSSNADSVARERNAPPRWRNYRGVRRRPWGKFAAEIQDPKRNGARTWLGTYKKEEDGALAYDIAAFKMRGRKAKLNFPHLIGSESPPELPERVVSETKLQCHWPESSSPSGCASEDNGGSQGSRSKKKRLTTLLNKLATNRSQIRSLK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4093g00001 222 ProSiteProfiles AP2/ERF domain profile. 94 152 IPR001471 GO:0003700|GO:0006355
Pral4093g00001 222 MobiDBLite consensus disorder prediction 176 222 - -
Pral4093g00001 222 SMART rav1_2 94 158 IPR001471 GO:0003700|GO:0006355
Pral4093g00001 222 Pfam AP2 domain 94 144 IPR001471 GO:0003700|GO:0006355
Pral4093g00001 222 SUPERFAMILY DNA-binding domain 94 153 IPR016177 GO:0003677
Pral4093g00001 222 FunFam Ethylene-responsive transcription factor 2 93 153 - -
Pral4093g00001 222 Gene3D AP2/ERF domain 93 153 IPR036955 GO:0003700|GO:0006355
Pral4093g00001 222 MobiDBLite consensus disorder prediction 51 90 - -
Pral4093g00001 222 CDD AP2 94 154 IPR001471 GO:0003700|GO:0006355
Pral4093g00001 222 PANTHER DNA-BINDING DOMAIN 57 194 IPR044808 GO:0003700|GO:0009873
Pral4093g00001 222 PRINTS Ethylene responsive element binding protein signature 134 154 IPR001471 GO:0003700|GO:0006355
Pral4093g00001 222 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4093g00001 Pral-Chr4093 9564 11364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4093g00001 95 176 AP2-EREBP Transcription Factor Family AT2G44840 61.053 1.40e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4093g00001 AP2 3.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4093g00001 K09286 - pcin:129296372 184.496