Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4092g00023 ATGGGGGGCATCAGAAGAGGTGAACTGGATGCGTTTCCAAGAAAGATGACACAGCAACGCCACGTGGAGCTGGTCTCTGAGCAACTCCATGGCGCGGTGTTTTCCGGTGAGCACGAAGACACCGTGAAACCATCAGCAGGTGGTGATAGAGCCGATAATAATGTTAGTAGTAATGCAGATTCTGTGGCGCGTGAAAGGAACGCGCCGCCTAGATGGAGGAATTATAGGGGTGTGAGGCGTAGGCCGTGGGGGAAGTTTGCGGCTGAGATCCAGGACCCGAAGAGGAACGGAGCAAGAACGTGGTTAGGGACATATAAGAAGGAAGAGGATGGAGCATTGGCTTATATATAG 351 0.5242 MGGIRRGELDAFPRKMTQQRHVELVSEQLHGAVFSGEHEDTVKPSAGGDRADNNVSSNADSVARERNAPPRWRNYRGVRRRPWGKFAAEIQDPKRNGARTWLGTYKKEEDGALAYI 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4092g00023 116 Gene3D AP2/ERF domain 73 116 IPR036955 GO:0003700|GO:0006355
Pral4092g00023 116 ProSiteProfiles AP2/ERF domain profile. 74 116 IPR001471 GO:0003700|GO:0006355
Pral4092g00023 116 SUPERFAMILY DNA-binding domain 74 115 IPR016177 GO:0003677
Pral4092g00023 116 PANTHER DNA-BINDING DOMAIN 41 115 IPR044808 GO:0003700|GO:0009873
Pral4092g00023 116 SMART rav1_2 74 115 IPR001471 GO:0003700|GO:0006355
Pral4092g00023 116 Pfam AP2 domain 74 116 IPR001471 GO:0003700|GO:0006355
Pral4092g00023 116 CDD AP2 74 115 IPR001471 GO:0003700|GO:0006355
Pral4092g00023 116 MobiDBLite consensus disorder prediction 36 68 - -
Pral4092g00023 116 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Pral4092g00023 116 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4092g00023 Pral-Chr4092 292715 293945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4092g00023 75 115 AP2-EREBP Transcription Factor Family AT2G44840 80.488 2.87e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4092g00023 AP2 7e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4092g00023 K09286 - pcin:129296372 104.375