Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4092g00021 ATGAACTCTAATCATTCTCCTTTCGAATCACTTCAACAATACCTGGTCGAAGAAGACGATCCTTCCTCCTCCATGACTCTCATGAATGGCTTCTTCACTGGCAGCAACCGTACTTCGAATCTGGACTGTGACATGGCTTTGCCGGAGCAGGGAGTTAGCAGCTCCACTGGGAACGCGCCACCAAGATGGAGGAATTACCGAGGTGTGAGGCGGCGGCCTTGGGGGAAGTTCGCTGCTGAGATCCGGCACCCGAATGGAAACGGTGCAAGGACGTGGCTGGGAACTTATGAGAAGGAAGAGGATGCAGCTCTGGCTTATGATAGAGCCGCTTTCAAGATGCATGGTAGAAAAGCCAAGCTCAATTTTCCTCACCTCATTGCGCCGCAGCCACCGCCGGAGCCGGCGGCAAGAGTGGTGGCTGGACAGAAACGGCACAGCTCGCCGGAACCTTCGTCGCCGTCAAACAAGACATCTGAGGATGATGGATCTCAAGGGTCAAGCAAGAAGAAGAGCCTGACTGAACTATTGAACAAGTTAGCAGCAAATAGAAGCCATGTCAGATTGGGTTGA 570 0.5281 MNSNHSPFESLQQYLVEEDDPSSSMTLMNGFFTGSNRTSNLDCDMALPEQGVSSSTGNAPPRWRNYRGVRRRPWGKFAAEIRHPNGNGARTWLGTYEKEEDAALAYDRAAFKMHGRKAKLNFPHLIAPQPPPEPAARVVAGQKRHSSPEPSSPSNKTSEDDGSQGSSKKKSLTELLNKLAANRSHVRLG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4092g00021 189 SUPERFAMILY DNA-binding domain 65 124 IPR016177 GO:0003677
Pral4092g00021 189 FunFam Ethylene-responsive transcription factor 2 64 124 - -
Pral4092g00021 189 CDD AP2 65 125 IPR001471 GO:0003700|GO:0006355
Pral4092g00021 189 PRINTS Ethylene responsive element binding protein signature 105 125 IPR001471 GO:0003700|GO:0006355
Pral4092g00021 189 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Pral4092g00021 189 PANTHER DNA-BINDING DOMAIN 52 170 IPR044808 GO:0003700|GO:0009873
Pral4092g00021 189 MobiDBLite consensus disorder prediction 123 189 - -
Pral4092g00021 189 Gene3D AP2/ERF domain 64 124 IPR036955 GO:0003700|GO:0006355
Pral4092g00021 189 SMART rav1_2 65 129 IPR001471 GO:0003700|GO:0006355
Pral4092g00021 189 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Pral4092g00021 189 ProSiteProfiles AP2/ERF domain profile. 65 123 IPR001471 GO:0003700|GO:0006355
Pral4092g00021 189 MobiDBLite consensus disorder prediction 145 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4092g00021 Pral-Chr4092 256456 257113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4092g00021 53 159 AP2-EREBP Transcription Factor Family AT2G44840 59.633 6.86e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral4092g00021 AP2 2.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4092g00021 K09286 - pcin:129296372 197.978