Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4092g00019 ATGAACCCTAATTTTTCTCCTGTTGAATCAGTTGAACAATACCTTACAGATGACCCTTCCTTCATGGCTCTCTCGAATGGCTTCTTCATGGACAACCATACTAGGAATCTGAGCTATGACGCTGCTTTGCCGGAGCTGCAGGGTGTTAGTAGCTCCAGTGATACGGTGTTTTCCGCCGGGATTAATGATCACAAAATTATGGCTCGGCCAGGTGGTTATGATATGGCTGGTGGTAGTAACCCAGGATCTGTGGCGGGTGAAAAGAACGCGCCACCTAGATGGAGGAATTACAGAGGCGTGAGGCGGCGGCCATGGGGGAAGTTTGCGGCGGAGATTCGGGACCCGAACAGGAATGGTGCGAGGACATGGCTGGGAACTTATGAGAGGGAGGAGGATGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGAAGGGTAGGAAAGCTAAGCTCAATTTTCCACACCTTATTGGGTCAGAACCACTGCCGGAGCCGGCAAGAGTAGTCGCCGGACAGAAACGGCGCCGCCTTCTGGAAGGAAAGCCAGTAGGCTGGTCTACAGAATAA 567 0.515 MNPNFSPVESVEQYLTDDPSFMALSNGFFMDNHTRNLSYDAALPELQGVSSSSDTVFSAGINDHKIMARPGGYDMAGGSNPGSVAGEKNAPPRWRNYRGVRRRPWGKFAAEIRDPNRNGARTWLGTYEREEDAALAYDRAAFKMKGRKAKLNFPHLIGSEPLPEPARVVAGQKRRRLLEGKPVGWSTE 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4092g00019 188 FunFam Ethylene-responsive transcription factor 2 95 155 - -
Pral4092g00019 188 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Pral4092g00019 188 PRINTS Ethylene responsive element binding protein signature 136 156 IPR001471 GO:0003700|GO:0006355
Pral4092g00019 188 PANTHER DNA-BINDING DOMAIN 70 160 IPR044808 GO:0003700|GO:0009873
Pral4092g00019 188 ProSiteProfiles AP2/ERF domain profile. 96 154 IPR001471 GO:0003700|GO:0006355
Pral4092g00019 188 SMART rav1_2 96 160 IPR001471 GO:0003700|GO:0006355
Pral4092g00019 188 Pfam AP2 domain 96 146 IPR001471 GO:0003700|GO:0006355
Pral4092g00019 188 CDD AP2 96 156 IPR001471 GO:0003700|GO:0006355
Pral4092g00019 188 SUPERFAMILY DNA-binding domain 96 155 IPR016177 GO:0003677
Pral4092g00019 188 Gene3D AP2/ERF domain 95 155 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4092g00019 Pral-Chr4092 215264 215830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4092g00019 81 168 AP2-EREBP Transcription Factor Family AT2G44840 67.416 7.27e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral4092g00019 AP2 1.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4092g00019 K09286 - pcin:129296372 170.244