Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4092g00012 ATGTTCGGATCCCATTATCATCATCATCTCTCACCTTCTGATTCTGAATATTCTTGCACTTTAGAAGCAATCCGACGGAACCTTCTCGACGACGAAATGATCGACTTGCCGATATATTCTCCGGCAACAATTTCCGACAACATCCCCATGCACGGCCAGAGTTCAGTGTGTGACAGTCATTACGTCAATGAACATGTGCCAGAAGTTTGCTCCAATATTGATAACAGTGTCCCAATGGAAGATGCTGTAGTGGCGCGTGAGGGCAACGCACCACCCGTTGAGCAGCGCTACCGGGGTGTTAGGCGCCGGCCTTGGGGGAAGTACGCGGCGGAGATCAGAGATCGGGCTAAAAATGGTGCTAGGATTTGGCTTGGAACTTATGATACAGCTGAGGATGCAGCTATAGCTTATGATAGAGCCGCTTACGAGATGCGTGGAGCTAAAGCGAAGCTTAATTTTCCTCACCTTGTCGGGTCGAATGTGTGGGAATCCGTTCGAGCTAGTCGGAAGCGGGCTGATTTTGCCATGGCCGGCGGCGAGAAGTATGCTTCAAAGCTTAAACGGATCAGGAAAAGTGAGGCGTGA 585 0.5026 MFGSHYHHHLSPSDSEYSCTLEAIRRNLLDDEMIDLPIYSPATISDNIPMHGQSSVCDSHYVNEHVPEVCSNIDNSVPMEDAVVAREGNAPPVEQRYRGVRRRPWGKYAAEIRDRAKNGARIWLGTYDTAEDAAIAYDRAAYEMRGAKAKLNFPHLVGSNVWESVRASRKRADFAMAGGEKYASKLKRIRKSEA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4092g00012 194 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
Pral4092g00012 194 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Pral4092g00012 194 PANTHER DNA-BINDING DOMAIN 85 166 IPR044808 GO:0003700|GO:0009873
Pral4092g00012 194 FunFam Ethylene-responsive transcription factor 2 95 155 - -
Pral4092g00012 194 CDD AP2 95 156 IPR001471 GO:0003700|GO:0006355
Pral4092g00012 194 SMART rav1_2 96 160 IPR001471 GO:0003700|GO:0006355
Pral4092g00012 194 SUPERFAMILY DNA-binding domain 96 155 IPR016177 GO:0003677
Pral4092g00012 194 ProSiteProfiles AP2/ERF domain profile. 96 154 IPR001471 GO:0003700|GO:0006355
Pral4092g00012 194 Pfam AP2 domain 96 146 IPR001471 GO:0003700|GO:0006355
Pral4092g00012 194 Gene3D AP2/ERF domain 95 156 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4092g00012 Pral-Chr4092 157003 157702 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4092g00012 28 188 AP2-EREBP Transcription Factor Family AT2G44840 46.341 2.03e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral4092g00012 AP2 3.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4092g00012 K09286 - pcin:129297492 170.629