Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4092g00001 ATGTCTGATCGTTTACCCCAAGAAATTGTGGAGGAAATCCTTCACAGACTACCCGTCAAGTCTCTTGTGAAATTCATCACGATTCATCTTCATCAAGAGGAGTTTTACTCATTGTACTCAGTTAATCAGCAAACCAATCACTTCTCTGTAGAGAGATTCCCACTCTCTCATCTATTTCGGCGGGATCGTCTTGATATATTTGCTGGCACATGCAATGGCCTCGTCTGTGCTGCTGACTATTCATCCTTCCATTCCGCAACTATCCTTATTTGGAATCCCTTGCTTCGAAAATATTTGGTGCTTCCCAAACCAATCATGACCTGCAAAAAACGCAAACGTCAACTTTATGACGACTATCACCTACATTTTGGGTTTGGTTTTGATTCCAAGAATAACGATTATAAGGTCATTAGACTCATGATTCTTTGCGCTGAACAAGATACTCCTCACGTTGAGGTGTACTCTCTTGTTTCTCGTTCTTGGAGAATTATTGATGTTAGGGTTCCTCCGTTTTTCTTTTGTTATTTAAACAATTGGTTAGCCCCAATAGCTGTGAATGGAGCGGTACATTGGGTTGTTGGTCGTCGTGGATTTGAGCGGTACAAATTTATTTTGTCATTTGATGTAACTGAAGAGACATTTGGAGAATTAATGTTACCACAACAGTCGAGGAAAGTCGCGTCAACATTACTTGCTGTGGAAGGAGGCCATTCGCTTGCCGTGGTGAATCATTTTATGAAAAGGAACCGACGGGTGTTCAGTATTTGGGTGATGAAAAAATATGGTGTTATCGAGTCATGGACTGAAATATTCCAATGTGATTCAAAAAGTTATGGGGGCGTATCAGGCATATTAGCTCTAACTACTGGTGGAAAAGTGGTTGTGAGACTTGCAAGTGAAGTTATTACTTTAATTGATCCAATCAATGGATCGTTGGAGCCTGTGGGACAGCAGGGATGTTCTGAAGCTTATGCTGGTTCTTATGTTGAGAGTTTGTTCCTAATAAACAAAGAACCTGATGTTTTGTCTTTCTAA 1035 0.4048 MSDRLPQEIVEEILHRLPVKSLVKFITIHLHQEEFYSLYSVNQQTNHFSVERFPLSHLFRRDRLDIFAGTCNGLVCAADYSSFHSATILIWNPLLRKYLVLPKPIMTCKKRKRQLYDDYHLHFGFGFDSKNNDYKVIRLMILCAEQDTPHVEVYSLVSRSWRIIDVRVPPFFFCYLNNWLAPIAVNGAVHWVVGRRGFERYKFILSFDVTEETFGELMLPQQSRKVASTLLAVEGGHSLAVVNHFMKRNRRVFSIWVMKKYGVIESWTEIFQCDSKSYGGVSGILALTTGGKVVVRLASEVITLIDPINGSLEPVGQQGCSEAYAGSYVESLFLINKEPDVLSF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4092g00001 344 Pfam F-box domain 3 24 IPR001810 GO:0005515
Pral4092g00001 344 Pfam F-box associated 183 278 IPR006527 -
Pral4092g00001 344 PANTHER BNACNNG10540D PROTEIN 32 280 - -
Pral4092g00001 344 NCBIfam F-box protein interaction domain 70 295 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4092g00001 Pral-Chr4092 20089 21266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4092g00001 115 295 Carbohydrate Esterase AT1G25141 27.419 9.53e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4092g00001 - - pcin:129288916 331.257