Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4090g00014 ATGAATAACATAGTATACAGCTTGACGGTGTGCTTCACCGTAATCTTTACAGCCTTTATCCTCTCAGTAATATCATATTGTTGCACCAGACAGTCCAACACAGATGGGGCTGATACCAGAAATGTTGAAGCTACAGAAGACTCGAACCAGGCGGCGGCAGCGGCGGCCGTGACAGTAATGGAGCCATGCTTGGATGACCAAACTATGGTTTGCATGTACCCTAAGGTTCTTTGCAGTTCATCATCAAAAGCCAAGTTGTGGATTGATGAAGAAGATGATGGGATTTCAAGTAGTCCTTGCTGTTGCTCAATATGTTTGATGGATTATAAAGAATCTGATCTCTTGCGAGTTCTGCCAAAATGTGGTCATTTCTTTCATCTCAAGTGTGTTGATCCTTGGTTCACTATGCATCTGACCTGCCCTATTTGTAGGAGTTCGGTAAAGAATTTTCAAAACATATCCGAATCAAGCCAAGTCTGA 480 0.4271 MNNIVYSLTVCFTVIFTAFILSVISYCCTRQSNTDGADTRNVEATEDSNQAAAAAAVTVMEPCLDDQTMVCMYPKVLCSSSSKAKLWIDEEDDGISSSPCCCSICLMDYKESDLLRVLPKCGHFFHLKCVDPWFTMHLTCPICRSSVKNFQNISESSQV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4090g00014 159 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 148 IPR045899 -
Pral4090g00014 159 SMART ring_2 102 143 IPR001841 -
Pral4090g00014 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 154 IPR013083 -
Pral4090g00014 159 Pfam Ring finger domain 102 144 IPR001841 -
Pral4090g00014 159 SUPERFAMILY RING/U-box 101 150 - -
Pral4090g00014 159 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4090g00014 Pral-Chr4090 313350 313829 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4090g00014 1 146 C3H Transcription Factor Family AT5G06490 30.247 1.99e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4090g00014 - - ini:109153700 107.842