Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4090g00008 ATGGCTTCGCCTTCTTCGCCGGTGGATTCTGCCCCTCCTCCTGATCCACCCTCTGCAGTGCCTCTTCCCCTCTCGGCGCCACCGTCGTCTCGCCGTCTTCCGCCGCCGTGCTGGTCCCCCGATGAGACTGTGGCTCTGATCGACGCGTATCGTGACAAATGGTATTCCCTTGGTCGGGGAAATTTGAAGGCGACTCATTGGCAGGAGGTTGCCGATGTGGTAACGACTCGTTGTCCGAATGCGTCCCCGCCTAAGACCGCCGTCCAGTGCCGCCACAAGATGGAGAAGCTCCGTAAGCGGTACCGCACCGAGATCCAGCGTGCCCGGTCTTTGCCGGTTGCCCGATTCAATTCTTCGTGGGTCCATTTCAAGCGCATGGATTCTATGGAGAAAGGTCCTTCCCCTGTTAAAGCTGAGAACAATTCTGATAGCCCTGATGAGATTGACCATGACGACGACGAGGAGGATCAAGATTTGTACGAGGAATTTAAGAATGCTGGTGGGTCTAACACCAGGAGCTTGAATAAATTGTATAGGAACGGAATTGGCGGTGGTTCTGATGGCGGCGTCGGTGGAGGCGGATTTCGCATTCGGATTCCGACCGGGGTGAGTATAGCACAACCTGGCACCAAGTTTTACGGGAAGCTTGGTGATCAGAAATTTAACTCGAATTCGAACTCTGCCGCACCTAGCTCTAATTGCAGCCCCAATTACGGCACAAGGATTTTGAAAGAGAGAAGCGGACTGGGGAAGAGGGAGAGAGAGAGGGATCCAGTGGGAGAGATGGTGACTGCAATTAAGGTCTTAGGAGATGGGTTTGTGAGGATGGAGCACATGAAGATGGAGATGGCGAGAGAGATTGAAACCATGAGGATGGACATGGAAATGAAACGAACTGAGATGATTTTGGAGTCTCAACAACGGATTGTTGAGGCATTTGCTAAGGCAGTTTCAGAGAAGAAGAAGAAGGCTAAGAGAATGCCATCACCTTCAGAACCATAG 1002 0.524 MASPSSPVDSAPPPDPPSAVPLPLSAPPSSRRLPPPCWSPDETVALIDAYRDKWYSLGRGNLKATHWQEVADVVTTRCPNASPPKTAVQCRHKMEKLRKRYRTEIQRARSLPVARFNSSWVHFKRMDSMEKGPSPVKAENNSDSPDEIDHDDDEEDQDLYEEFKNAGGSNTRSLNKLYRNGIGGGSDGGVGGGGFRIRIPTGVSIAQPGTKFYGKLGDQKFNSNSNSAAPSSNCSPNYGTRILKERSGLGKRERERDPVGEMVTAIKVLGDGFVRMEHMKMEMAREIETMRMDMEMKRTEMILESQQRIVEAFAKAVSEKKKKAKRMPSPSEP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4090g00008 333 Coils Coil 91 111 - -
Pral4090g00008 333 SMART 118neu2 45 134 IPR006578 -
Pral4090g00008 333 MobiDBLite consensus disorder prediction 1 38 - -
Pral4090g00008 333 FunFam Trihelix transcription factor ASIL2 38 103 - -
Pral4090g00008 333 Pfam Myb/SANT-like DNA-binding domain 36 129 IPR044822 -
Pral4090g00008 333 MobiDBLite consensus disorder prediction 127 156 - -
Pral4090g00008 333 MobiDBLite consensus disorder prediction 7 35 - -
Pral4090g00008 333 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 16 319 IPR044823 -
Pral4090g00008 333 Gene3D - 38 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4090g00008 Pral-Chr4090 216807 218682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4090g00008 37 129 Trihelix Transcription Factor Family AT3G14180 37.634 8.14e-18 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral4090g00008 Myb_DNA-bind_4 1.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4090g00008 - - qsa:O6P43_017256 462.225