Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4086g00006 | ATGAACCTGATTGCAAAACTAAATAACCCATATATTGTGGAGTACAAAGATGCTTGGGTAGAGAAGGGGGAGTATATATGCATTGTAACTGGCTATTGTGAAGGAGGTGACATGGCTGAGAACATAAAGAAAGCTCGGGGATCATTTTTTCCTGAGGAGAAGGTCTGCAAATGGCTCACTCAGTTGCTGATAGCTGTGGACTACTTGCACTCTAATCGTGTGCTCCATAGAGATCTTAAGTGTTCCAACATATTTCTCACCAAAGATAACGACATTCGTCTTGGTGACTTTGGTCTGGCAAAGCTGCTTAACACGGAAGACCTTGCTTCCTCGGTTGTTGGAACTCCGAACTATATGTGTCCTGAGCTACTTGCAGATATACCCTATGGTTATAAATCTGATATATGGTCACTTGGATGCTGCATGTTTGAAATTGCAGCACATCAACCAGCATTTCGTGCTCCTGATATGGCTGGGCTTATCAATAAAATAAATAGGTCCTCCATTTCTCCATTGCCTATTGTTTATTCTTCCACCTTGAAACAACTCATAAAGAGCATGCTCAGGAAAAACCCTGAACATAGACCGACAGCAGCTGAGTTGTTAAGGCACCCTCTTTTACAACCATATGTTCTCCGATGTCGTAATGCATCATCTAATGTTCTTCCAGTGTATCCCATAGTCAATTCAAAGGATAAAACAAAGAGGTCTTATAAATCTGGTGGCAGAAAAGAACGTAAGGACAAAGAATTGGGATTACAAAATCTTTTGATTAGGATTCATCCATTTCAGGGAAATGAAGATATGCCTAAGAACGGCAAGCAATCAGTCTCAAGCAGTGCAGAAGACATCCTTCAGACCAAGCTGGTTGATCCTACCAGCTTCATAACTGAATCATCTACTAGTATCAGTGGCTCGAAGGATGGATCAACAACATCTGAATCAACCATTTGCAGCATGGGCAAGGAAGCAGACTATAAAAGCATACCTACAAGGGAGACAACTGACAATGAAATTACGTCAGAGGGTATCCCAGTTCCTAAGCATGAAGAACAAGTAGTTGCTGCTGAACAACGAAAATCAGAAGGGGTTGACATGATTGCAGGGACCACGGAAGTTGAGGATGCTTTTCCTAATGGAGATTACGATAAAGCTGAAGTGCGGAGAGATGTCAATCTTGAGGACTTCAGGAAATCAACAGCTTCAAGCGAAGGAAGCACTGATAAAGGTGGGTCTCTTGATGAGGAATTGTCACCACCAGCGTTGCAGCCTAGCAGTAAGGTTGAAGATGACCCTGAATCGGGAGGAGTCTACTTACAGAAGAGGGAAGGCCCAGATGCATTTACAGAAGGCTCCCATATGTGCTTATCTTCTGAGACTAATGATACCGTGGCAGCTAATGATGAAGGCGGAGAAAAGCCACACGACCTGAGTTGCTCCAGGCATAAAGAAAATGATAGTGCTTGTGTGGTTGATCAGACACCAAGTGACAATTCATTGAGTACAATTACTGCAAGAGGGGGTGATGAAGCCAAGAGCGAGTTGGATAGTTCCTGCCAGGAAAGAGCTCATGCTCTAGAGACCCTACTTGAATTATGTGCTGAGCTACTCAAGCAAGACAAACTCGAAGAGCTTGCCGGCGTGCTGAGACCATTTGGGCCGGAAGCCGTCTCTTCCAGAGAGACGGCAATATGGTTGACAAAGAGCCTCATGTCTGCACAAAAACTCAATCCTGAAACCTAA | 1743 | 0.4378 | MNLIAKLNNPYIVEYKDAWVEKGEYICIVTGYCEGGDMAENIKKARGSFFPEEKVCKWLTQLLIAVDYLHSNRVLHRDLKCSNIFLTKDNDIRLGDFGLAKLLNTEDLASSVVGTPNYMCPELLADIPYGYKSDIWSLGCCMFEIAAHQPAFRAPDMAGLINKINRSSISPLPIVYSSTLKQLIKSMLRKNPEHRPTAAELLRHPLLQPYVLRCRNASSNVLPVYPIVNSKDKTKRSYKSGGRKERKDKELGLQNLLIRIHPFQGNEDMPKNGKQSVSSSAEDILQTKLVDPTSFITESSTSISGSKDGSTTSESTICSMGKEADYKSIPTRETTDNEITSEGIPVPKHEEQVVAAEQRKSEGVDMIAGTTEVEDAFPNGDYDKAEVRRDVNLEDFRKSTASSEGSTDKGGSLDEELSPPALQPSSKVEDDPESGGVYLQKREGPDAFTEGSHMCLSSETNDTVAANDEGGEKPHDLSCSRHKENDSACVVDQTPSDNSLSTITARGGDEAKSELDSSCQERAHALETLLELCAELLKQDKLEELAGVLRPFGPEAVSSRETAIWLTKSLMSAQKLNPET | 580 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4086g00006 | 580 | CDD | STKc_Nek | 1 | 207 | - | - | |
Pral4086g00006 | 580 | ProSiteProfiles | Protein kinase domain profile. | 1 | 207 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral4086g00006 | 580 | FunFam | serine/threonine-protein kinase Nek6 isoform X2 | 33 | 221 | - | - | |
Pral4086g00006 | 580 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 74 | 86 | IPR008271 | GO:0004672|GO:0006468 | |
Pral4086g00006 | 580 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 237 | IPR011009 | - | |
Pral4086g00006 | 580 | MobiDBLite | consensus disorder prediction | 489 | 506 | - | - | |
Pral4086g00006 | 580 | PANTHER | SERINE/THREONINE-PROTEIN KINASE NEK | 1 | 506 | - | - | |
Pral4086g00006 | 580 | MobiDBLite | consensus disorder prediction | 298 | 382 | - | - | |
Pral4086g00006 | 580 | SMART | serkin_6 | 1 | 207 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral4086g00006 | 580 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 286 | - | - | |
Pral4086g00006 | 580 | MobiDBLite | consensus disorder prediction | 466 | 488 | - | - | |
Pral4086g00006 | 580 | MobiDBLite | consensus disorder prediction | 298 | 319 | - | - | |
Pral4086g00006 | 580 | Pfam | Protein kinase domain | 2 | 206 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral4086g00006 | 580 | MobiDBLite | consensus disorder prediction | 395 | 516 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4086g00006 | Pral-Chr4086 | 18718 | 23385 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4086g00006 | 1 | 208 | MAP Kinase Kinase Kinase | AT1G53570 | 34.286 | 1.85e-31 | 126 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | NEK | Pral4086g00006 | Pkinase | 6.4e-53 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4086g00006 | K08857 | - | gmx:100793379 | 763.066 |