Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4086g00002 ATGGCTACATCCTGTATATACCTGTTCCTTCTCTCTGTGACCTTCACAACGTTCAATCTTGGTTCATCTTCGTCATCAGAGGCGGATATCCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCTAGGAAGGCTCTGTCAAGCTGGTCCAATACTTCCTCCACTCACTACTGTAACTGGACCGGAATCGCCTGCTCCTCCACTTCTCCTTCCCTCTCTGTCACGTCCATTAATCTTCAAAACTTGAACCTTTCTGGGGACCTCTCGTCTTCGATATGTGATCTTCCAAATCTGTCATACCTCAATCTTGCTGATAATTTATTCAACCAGCCCATCCCTCTCCATCTTTCTCAGTGTAGTTCGTTACAGACTTTGAATCTCAGTAATAATCTCATATGGGGAACCATCCCAATGCAGATTTCTCAGTTTGGTTCATTGAGAGTGCTTGATTTCAGCAGAAATCACATCGAAGGAAATATCCCAGAAAGCTTGGGCTCCCTGAAGAATCTCGAAGTCCTTAACATGGGAAGTAACCTACTATCAGGTGATGTGCCTGCTATCTTCGTGAATTTAACTAAGCTTGCCGTTCTTGACTTGTCTGAAAATCCATACTTGGAAAGTGAGATTCCAGAGGGTATGGGCGAACTTGGAAGTCTCAGGCAACTTCTGTTGCAAAGTTCTGGTTTTCACGGTGAAATTCCGGATTCTTTTGCGAACCTGCGTAGTTTGACCCATTTAGACCTCTCCCAGAACAATCTAACCGGTGAGATTTCTCAGGGTCTGGTGTCTTCTCTCAAGAACCTGGTGTCCTTTGATGTTTCACAGAACAAGCTTTCGGGGTCACTACCAAATGGCGTTTGTAATGCAAAAGGTCTCATAAATCTCAGTCTCCATACAAATATTTTCAGTGGTTCAATGCCCAACACCATTGGTGAATGTAAGAATCTTGAGAGATTTCAAGTTCAGAACAACGAGTTAACTGGAGACTTCCCTTCTTCGTTATGGTCATTACCTAAAGTTAAGCTCATTAGAGCTGAAAACAACAGATTCTCAGGACAAATACCTGAATCCATATCGGGAGCTGTTCAGTTGGAGCAAGTTCAGCTTGACAATAACAGCTTTGCTGGTAAAATTCCTCGTCTTGGGTTGGTCAAGAGCTTATACAGATTCTCTGCGTCTCTCAATCGTTTCTACGGAGAACTTCCTGTAAACTTCTGTGATTCCCCTGTTATGAGTATTGTGAATCTCTCTCACAATTCCCTTTCTGGTCCAATCCCAGAGCTGACCAAATGCAGGAAACTGGTTTCATTGTCTCTAGCAGACAATAGTCTTACCGGACAAATCCCTCCTTCCCTTGCTGACTTGCCAGTGCTAACTTACCTTGATCTTTCAGCTAACAATCTCACAGGCTCAATACCACTAGGACTTCAAAATTTAAAGCTTGCTCTTTTCAATGTGTCCTTCAATCAGCTATCTGGCAAGGTACCTTATTCCCTGATTTCTGGTCTTCCTGCTTCATTTTTGGAAGGAAACCCTGAACTTTGTGGCCCTGGATTACCCACTTCCTGTTCTGATGACCCTCCAAGAGACCATTCCGGAGGTCTCACTCCGCTGGCATGTGCCCTTATCTCTGTAGCATTCGTTGTGGGAACTGCGGTGTTTGTTGGTGGATTTATTTTGTATAGGAAGTTTAGCAAGAGGAATCAAATAGGATTTTGGCGCTCAGTGTTCTTCTATCCCCTTAGAATTACTGAGCAAGATCTGCTTATAGGAATGGATGAGAAAAGCTTGATTGGAAATGGGGGTGTTTTTGGCAAAGTTTATGTTGTGAGTTTACCTAGCGGTGAACAAGTGGCCGTAAAGAAGCTAGTCAATTTTGGCAACCAGACGTCAAAAAGTTTGAAAGCTGAGGTCAAGACATTGGCTAAGATTAGGCATAAGAATGTTGTTAAAATCCTGGGGTTTTGCCATTCTGATGAGTCAATCTTTCTCATTTATGAGTACTTGCGAGAAGGAAGCTTAGGGGACTTGATTTCCCGTGAGGATTTTGAGTTGCAGTGGGAGGCAAGATTGAGGATTGCCATCAGAGTCGCTCAAGCACTAGCTTATCTTCACAATGACTATGTTCCTCACTTGCTTCACAGAAACGTTAAGTCCAGGAACGTTCTGCTGGATTCAAACTTTGAGCCGAAACTCACAGATTTCGCTCTTGATCGAATCGTGGGAGAAGCCGCATTTCAGTCAACTGTTGCTTCTGAAGCAGCATCTTCCTGCTATAATGCTCCAGAATATGGGTACAGTAAGAAACCAACTGAAGAATTGGACATATACAGCTATGGTGTTTTATTGCTAGAGCTTGTGACTGGGAAGCAAGCAGAGCAAACAATATCAACAGAATCTCTTGACATAGTGAAGTGGGTTCGAAGGAGAGTGAACATCACTGATGGGATTCAAGTACTTGATCCCAAAATATCACATTCCAGTCAGCGAGAAATGATTGGAGCTCTGGAAATCGCTCTTCGTTGCACTTCCGTGGTGCCTGAAAAAAGACCATCGATGGTAGAAGTTGTTCGAGCTCTTCAGTTCCTTGAGTCACAAACCATCGCTGCAAATTCTCAGGATTCGAATGAGGAACCCTCGATTCCAATATGA 2649 0.4353 MATSCIYLFLLSVTFTTFNLGSSSSSEADILLSFKASIEDSRKALSSWSNTSSTHYCNWTGIACSSTSPSLSVTSINLQNLNLSGDLSSSICDLPNLSYLNLADNLFNQPIPLHLSQCSSLQTLNLSNNLIWGTIPMQISQFGSLRVLDFSRNHIEGNIPESLGSLKNLEVLNMGSNLLSGDVPAIFVNLTKLAVLDLSENPYLESEIPEGMGELGSLRQLLLQSSGFHGEIPDSFANLRSLTHLDLSQNNLTGEISQGLVSSLKNLVSFDVSQNKLSGSLPNGVCNAKGLINLSLHTNIFSGSMPNTIGECKNLERFQVQNNELTGDFPSSLWSLPKVKLIRAENNRFSGQIPESISGAVQLEQVQLDNNSFAGKIPRXLGLVKSLYRFSASLNRFYGELPVNFCDSPVMSIVNLSHNSLSGPIPELTKCRKLVSLSLADNSLTGQIPPSLADLPVLTYLDLSANNLTGSIPLGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPELCGPGLPTSCSDDPPRDHSGGLTPLACALISVAFVVGTAVFVGGFILYRKFSKRNQIGFWRSVFFYPLRITEQDLLIGMDEKSLIGNGGVFGKVYVVSLPSGEQVAVKKLVNFGNQTSKSLKAEVKTLAKIRHKNVVKILGFCHSDESIFLIYEYLREGSLGDLISREDFELQWEARLRIAIRVAQALAYLHNDYVPHLLHRNVKSRNVLLDSNFEPKLTDFALDRIVGEAAFQSTVASEAASSCYNAPEYGYSKKPTEELDIYSYGVLLLELVTGKQAEQTISTESLDIVKWVRRRVNITDGIXQVLDPKISHSSQREMIGALEIALRCTSVVPEKRPSMVEVVRALQFLESQTIAANSQDSNEEPSIPI 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4086g00002 884 Gene3D Ribonuclease Inhibitor 260 526 IPR032675 -
Pral4086g00002 884 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 862 - -
Pral4086g00002 884 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Pral4086g00002 884 Gene3D Ribonuclease Inhibitor 205 259 IPR032675 -
Pral4086g00002 884 SUPERFAMILY Protein kinase-like (PK-like) 595 864 IPR011009 -
Pral4086g00002 884 ProSiteProfiles Protein kinase domain profile. 593 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4086g00002 884 FunFam Leucine-rich repeat family protein 26 184 - -
Pral4086g00002 884 FunFam - 587 668 - -
Pral4086g00002 884 SUPERFAMILY L domain-like 24 302 - -
Pral4086g00002 884 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 263 526 - -
Pral4086g00002 884 Gene3D Phosphorylase Kinase; domain 1 586 668 - -
Pral4086g00002 884 SMART LRR_typ_2 190 215 IPR003591 -
Pral4086g00002 884 SMART LRR_typ_2 94 118 IPR003591 -
Pral4086g00002 884 SMART LRR_typ_2 142 165 IPR003591 -
Pral4086g00002 884 SMART LRR_typ_2 455 478 IPR003591 -
Pral4086g00002 884 SMART LRR_typ_2 166 189 IPR003591 -
Pral4086g00002 884 SMART LRR_typ_2 264 288 IPR003591 -
Pral4086g00002 884 SMART LRR_typ_2 239 263 IPR003591 -
Pral4086g00002 884 ProSiteProfiles Leucine-rich repeat profile. 77 98 IPR001611 GO:0005515
Pral4086g00002 884 PRINTS Leucine-rich repeat signature 242 255 - -
Pral4086g00002 884 PRINTS Leucine-rich repeat signature 455 468 - -
Pral4086g00002 884 Pfam Protein kinase domain 594 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4086g00002 884 SUPERFAMILY L domain-like 208 520 - -
Pral4086g00002 884 Gene3D Transferase(Phosphotransferase) domain 1 669 881 - -
Pral4086g00002 884 Gene3D Ribonuclease Inhibitor 23 204 IPR032675 -
Pral4086g00002 884 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 669 869 - -
Pral4086g00002 884 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Pral4086g00002 884 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4086g00002 Pral-Chr4086 2817 5901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4086g00002 31 862 Receptor kinase-like Gene Family AT5G06940 63.680 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4086g00002 Pkinase 7.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4086g00002 - - gmx:100794428 1375.15