Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4085g00022 ATGGAGTCTCACGATCAGACAGGATGCCAGGCACCAGATCGCACCATTCTTTGTATTAACAATTGTGGCTTCTTTGGCAGAGCTGCTACCATGAATATGTGCTCCAAATGTTACAAGGATATGCTGCTGAAGCAGGATCAGGCCAAACTAGCTGCATCATCAGTTGAAAACATTGTGAATGGCAGCTCTAGCAGCGGCAGTGGGAAAGAGGCTGCAACTGCATGTTCTACTGATGTACAAATCGGAACTATGGAGGTCAAGACAATACATGCAGAAATTTGTCAGGATTCATCCTCTAGTGAGAGTTTAGAGATGAAAGTCAAGGCTGGTCCCAGCAGATGTACAACTTGCCGGAAGCGTGTTGGATTAACTGGTTTTAGCTGCAAATGTGGGAACATTTTCTGTCCAACACATCGCTATTCTGACAAACACAATTGCCCTTTTGATTATCGGACCGTTGGTCAGGATGCTATAGCCAAAGCCAACCCTGTAGTTAAGGCAGAAAAGCTTGACAAAATCTAG 522 0.4483 MESHDQTGCQAPDRTILCINNCGFFGRAATMNMCSKCYKDMLLKQDQAKLAASSVENIVNGSSSSGSGKEAATACSTDVQIGTMEVKTIHAEICQDSSSSESLEMKVKAGPSRCTTCRKRVGLTGFSCKCGNIFCPTHRYSDKHNCPFDYRTVGQDAIAKANPVVKAEKLDKI 173
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral4085g00022 173 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Pral4085g00022 173 Gene3D - 88 169 IPR035896 -
Pral4085g00022 173 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Pral4085g00022 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Pral4085g00022 173 FunFam Zinc finger AN1-type containing 6 87 169 - -
Pral4085g00022 173 SUPERFAMILY AN1-like Zinc finger 103 168 IPR035896 -
Pral4085g00022 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 55 - -
Pral4085g00022 173 Pfam AN1-like Zinc finger 114 150 IPR000058 GO:0008270
Pral4085g00022 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Pral4085g00022 173 Gene3D - 1 66 - -
Pral4085g00022 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 173 - -
Pral4085g00022 173 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral4085g00022 Pral-Chr4085 77295 79185 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4085g00022 5 173 C2H2 Transcription Factor Family AT3G52800 42.105 8.25e-40 131
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4085g00022 - - zju:107432423 262.307