Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4084g00051 ATGTCTTCCAGTATCAACCAAACAACAACTCACCACGAACCACTTCTATCTCCTCCACACCGTCGTCGTCATCAGCAACCACAACAGCATCATCATACCCAAGATCAACATGTTTCTTTCGGAATAATGCAATCTTCTCCTCCGTCGACGTTTTCCGTCCCCGGAAACTACCTAAGCAAGGATTCCGGAGCTTATGATCTGGGAGATTTGGATCAGGCCCTTTTTCTCTATCTTGATGGACAACAAGACCCATCCAGTGTTCAACACCAAAGACCAGAGAACTCGTCATCGTCACAAATAAAGCCTCCCACTCTCAACATATTCCCATCCCAACCTATGCATATCCACCTGCCCTCATCCAAGGCTAGCATGGAAGTAGCTCCTCCGCAAGGCAGCAGTGGTCCCAAAGCCCCGTCTGAGCCGTCAGTGGATTTGGCCAACCCGCGGAACGAAGCCGCCTCGGCCTCTGAACCAACCAATTCCAAAACGGTCAAGCGAGAGAACAATCGTAAGGGTCCAACGCCGAGTTCTGAACAGGAAGGCCCCAAAACCCCCGATCCTAAGACTCTCAGAAGACTTGCTCAGAATAGAGAGGCGGCCAGGAAAAGCAGGCTCAGGAAAAAGGCATATGTTCAGCAGCTAGAGTCAAGTAGAATTAGGCTTAATCAGCTGGAGCAAGAGCTACATCGTGCTAGAGCTCAAGGAGTATTTTTGGCGGGAGGTGCAGCTTTGGGAGGAGAACAAGGCCTTCCTATGGCTATGAGCAGCATTAGCTCAGAGGCTGCAATGTTCGACGTAGAATATGCGAGATGGCTAGAAGAACACCATCGAATAGTGTGCGAGCTAAGAGCTGCAGTTCAAGAGCACCTTCCAGAGAACGAGCTGCGGCTGTTTGTAGATAATTGCTTGGCACAATATGACCAATTAACGAATCTCAAGAGCTTACTGGCCAAAACAGACGTATTCCACATCGTGTCTGGCATGTGGATCACCCCAGCCGAACGATGCTTCATGTGGATCGGTGGGTTCAGGCCATCAGAACTCATTAAGATAATTGTGAGTCAAATTGAACCCCTGACGGAGCAACAAATACTGGGAATATATGGGTTGCAACAGTCTACGCAAGAGGCAGAAGATGCTCTCTCCCAAGGGCTTGAGGCTCTCAATCAATCTCTCTCGGACACTATAACATCTGACTCACTGAGCTGTCCGCCCAATATGGCCAACTTCATGGGACAGATGGCCATGGCCATAAATAAGCTCTCTACTCTAGAAGGTTTCGTGAGACAGGCAGATAATCTGAGGCAACAGACCATTCACCGTCTGCATGAGATACTGACGACGCGGCAGGCGGCGAGGTGTATGCTGGCCATCGCCGAGTACTTCCATCGTCTCAGAGCTCTCAGTTCTCTGTGGATGGGACGACCTCGTCAAGAATGA 1440 0.4993 MSSSINQTTTHHEPLLSPPHRRRHQQPQQHHHTQDQHVSFGIMQSSPPSTFSVPGNYLSKDSGAYDLGDLDQALFLYLDGQQDPSSVQHQRPENSSSSQIKPPTLNIFPSQPMHIHLPSSKASMEVAPPQGSSGPKAPSEPSVDLANPRNEAASASEPTNSKTVKRENNRKGPTPSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELHRARAQGVFLAGGAALGGEQGLPMAMSSISSEAAMFDVEYARWLEEHHRIVCELRAAVQEHLPENELRLFVDNCLAQYDQLTNLKSLLAKTDVFHIVSGMWITPAERCFMWIGGFRPSELIKIIVSQIEPLTEQQILGIYGLQQSTQEAEDALSQGLEALNQSLSDTITSDSLSCPPNMANFMGQMAMAINKLSTLEGFVRQADNLRQQTIHRLHEILTTRQAARCMLAIAEYFHRLRALSSLWMGRPRQE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4084g00051 479 MobiDBLite consensus disorder prediction 32 55 - -
Pral4084g00051 479 CDD bZIP_HBP1b-like 188 240 - -
Pral4084g00051 479 FunFam BZIP family transcription factor 187 236 - -
Pral4084g00051 479 SUPERFAMILY Leucine zipper domain 188 230 IPR046347 GO:0003700|GO:0006355
Pral4084g00051 479 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 230 IPR004827 GO:0003700|GO:0006355
Pral4084g00051 479 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Pral4084g00051 479 ProSiteProfiles DOG1 domain profile. 261 475 IPR025422 GO:0006351|GO:0043565
Pral4084g00051 479 PANTHER TRANSCRIPTION FACTOR TGA9 105 478 - -
Pral4084g00051 479 SMART brlzneu 184 270 IPR004827 GO:0003700|GO:0006355
Pral4084g00051 479 Pfam Seed dormancy control 279 354 IPR025422 GO:0006351|GO:0043565
Pral4084g00051 479 Coils Coil 207 234 - -
Pral4084g00051 479 Pfam bZIP transcription factor 188 218 IPR004827 GO:0003700|GO:0006355
Pral4084g00051 479 Gene3D - 187 236 - -
Pral4084g00051 479 MobiDBLite consensus disorder prediction 83 106 - -
Pral4084g00051 479 MobiDBLite consensus disorder prediction 1 55 - -
Pral4084g00051 479 MobiDBLite consensus disorder prediction 83 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4084g00051 Pral-Chr4084 290278 296643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4084g00051 55 479 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.667 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4084g00051 DOG1 4.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4084g00051 K14431 - gmx:100815176 694.501