Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4084g00040 ATGCACCATTCTCCGCAGATCTTCAACCTTCAAGGGGAATCCGGCGCAGGAACTCAAAGTCTGTCCAAAGTTGGAGGACCAGAACACCAAACTTTCGAAACCATTGGATTACCCTTCAACATTATGTCTCCTCTTCAAACATCAGCTGCCTTGTGTGGAACTAGAGCCTGGACGAGCTTTCACCAACATGACCCTCAGATTGATGTTCCTTCTAGTTTTTGTTCTGAGCTCCCACAGGAAATAGATTCGCCACTTCCATGCCATAAATCTTCTGGGGATAACTCCGCCGTTACCGCTAAACAGTATCCATCAGCCTCCCAATTTAGTTTCACCAACTCCTTGCACTCCATTGTTGAATCTTTCTTGTCCAGCAGCGAAGAAAGCTTTTCTTCTTCTGATATGTATGGTGAGTGTCCCTCTGATTCAGACAGATATAGAGAGTTTCTCGGTGAAGATAACATGTCTTTACATGAGCGCTCAAAAGAAAATGAATTGCGCGCCGAGGACGCTGCTGAAGAAGTGAAACCCGTGGAAATTTCCTTTCAGCATAGAAATCTGCAGTCACCAGATAAGCAGTGTTCACGGGCTTGTGGGGTTGCTTGTGTTCCATCTCCTATCAACACTGTTTCTAGGAGCTCTCTAACTCGTAAAAGAAGAATAAGATGGACCAAGGATCTTCATGAGACTTTCGTCATGATTGTTAATTGCCTTGGCGGTCCCGAGAAGGCAAAGCCTAAGTCCATACTCAAGATGATGGATTCAGATATGCTGACCATTTCTCACATCAAAAGTCATTTGCAGAAATATCGTTCTACAATATGCGTGCGGAAAGATCTGCAGGAAAGATCTGGAGAAGGAAACCAACCAGAAGGAGTCTTCGAGCTTCAACTTAAAATCCATAAGCAAATTGAGGAATCACTACAACTTCAACGTGAGGTCCAAAGGAGTCTCCACGAACAGCTAGAGATACAACAGAATTTGCAATTACTAGTGAAACAGCAGAGGAAGCAGCTCAAAATAACGTCAGATTACCAAAAGCAGGGAAGCAAACTGCAAGTGTGTGCCCCAAAATGA 1074 0.4413 MHHSPQIFNLQGESGAGTQSLSKVGGPEHQTFETIGLPFNIMSPLQTSAALCGTRAWTSFHQHDPQIDVPSSFCSELPQEIDSPLPCHKSSGDNSAVTAKQYPSASQFSFTNSLHSIVESFLSSSEESFSSSDMYGECPSDSDRYREFLGEDNMSLHERSKENELRAEDAAEEVKPVEISFQHRNLQSPDKQCSRACGVACVPSPINTVSRSSLTRKRRIRWTKDLHETFVMIVNCLGGPEKAKPKSILKMMDSDMLTISHIKSHLQKYRSTICVRKDLQERSGEGNQPEGVFELQLKIHKQIEESLQLQREVQRSLHEQLEIQQNLQLLVKQQRKQLKITSDYQKQGSKLQVCAPK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4084g00040 357 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 214 345 IPR044848 GO:0003700
Pral4084g00040 357 MobiDBLite consensus disorder prediction 1 27 - -
Pral4084g00040 357 Gene3D - 216 272 - -
Pral4084g00040 357 NCBIfam myb-like DNA-binding domain, SHAQKYF class 217 271 IPR006447 GO:0003677
Pral4084g00040 357 SUPERFAMILY Homeodomain-like 215 271 IPR009057 -
Pral4084g00040 357 Pfam MYB-CC type transfactor, LHEQLE motif 302 339 IPR025756 -
Pral4084g00040 357 FunFam Two-component response regulator 213 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4084g00040 Pral-Chr4084 235299 237645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4084g00040 205 351 G2-like Transcription Factor Family AT4G28610 48.026 4.80e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4084g00040 Myb_CC_LHEQLE 2.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4084g00040 - - pcin:129304451 452.21