Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4084g00026 ATGGAAATCGATTCGGAGAAGAGTCTCTGCAGAGCGCTTTGTGCCTACAACTCCATGGATGAAGTGTTTGAAATTCAGAAAGAAACGTACAGGGGGCAGCAATACAGTCAGATTTACTTTGCTCGTCTTCACTTGATGAGAACTCTCCTGTATTCCCTTGTATCCCGGTGGAAGCCTCATTTACCTGTATGCACAGTGTTGGGACTGGAGGAGGGCAAGGAATGTATCATCGTTGGAACCCTTTATAAACACATGAAGCTCAAACCTTGCATACTTGATGAGTACTCTAAGGAGAGATCTAGAACGCCACTTGTCAGGCCTCATAACTTCATGCACCCAGATGATCATCTAGTTTTGGAGGATGAAAGTGGGAGAGTTAAGCTCAGTGGGGATCTCATTTCACCTTCTGTGTATATAACAGGGATCGTAGTTGCTATACATGGGAAAGAAACTGGGGCTGGTGAGTTTTTGGTTCTAGATGTCCTGGAAGCAGGCCTACCACCACAAACAGAACTTCCTCTTAAATCAAGGGAAGACAAATATGTCGTTTTTGTGTCCGGGTTAAGTTTTGGGAGCAGCAACTCCAATCCTCTCCAATTTCAGCTCTTCATTGATCATATTACTGGTCATTTAGGAGATGAGAAGGAGCAAATTTTGGCATCCCAAATCGTTCATGTTGTCATAGCAGGGAATTCTGTTGAGTTCCCTCGTGAACTTCTTAACGGGCAGATTGCTGTAGGTTTGCCTTTGGATATCATGCCAGGACCCATGGACCCAGCTAACTACGCATTACCACAGCAGCCTCTGCATAGATGCCTTTTCCCTGGGTCATCTGCTTATAACACTTTTAGATCCTGCACAAATCCTCACTGTTTTGAGCTTGATAATATTAGGTTTCTCGGGACATCAGGTCAAAATATAGATGATCTTGATAAGTATTCAGAGGCCAAAGATAAACTTGAATTCATGGAAAGGACTCTACGGTGGAGACATTTGGCACCAACAGCACCTAATACACTCGGGTGCTATCCTTTCACTGATAGGGATCCTTTCTTCCTTGAGAGCTGTCCCCATGTGTATTTTGTTGGAAATCAAGATAAATATGAAACTCGTGTGATCAAAGGATCTGAAGGGCAGTTGGTGAGGCTCATTTGCGTTCCTAAATTCAACGAGACTGGAGTTGCTGTTATGCTAAACCTGAGGGATCTTGAGTGTCATGCTCTTAGTTTTGGGACGCAATTCAGCTCTTAA 1251 0.438 MEIDSEKSLCRALCAYNSMDEVFEIQKETYRGQQYSQIYFARLHLMRTLLYSLVSRWKPHLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSRTPLVRPHNFMHPDDHLVLEDESGRVKLSGDLISPSVYITGIVVAIHGKETGAGEFLVLDVLEAGLPPQTELPLKSREDKYVVFVSGLSFGSSNSNPLQFQLFIDHITGHLGDEKEQILASQIVHVVIAGNSVEFPRELLNGQIAVGLPLDIMPGPMDPANYALPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNIRFLGTSGQNIDDLDKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFFLESCPHVYFVGNQDKYETRVIKGSEGQLVRLICVPKFNETGVAVMLNLRDLECHALSFGTQFSS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4084g00026 416 Gene3D - 40 164 - -
Pral4084g00026 416 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 12 239 IPR024826 -
Pral4084g00026 416 Gene3D - 172 415 - -
Pral4084g00026 416 FunFam DNA polymerase delta subunit 2 40 164 - -
Pral4084g00026 416 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
Pral4084g00026 416 CDD MPP_PolD2_C 181 410 IPR041863 -
Pral4084g00026 416 Pfam DNA polymerase alpha/epsilon subunit B 247 368 IPR007185 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4084g00026 Pral-Chr4084 164724 170625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4084g00026 1 415 Core DNA Replication Machinery Family AT2G42120 74.886 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4084g00026 K02328 - qsa:O6P43_005838 738.413