LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4084g00019	ATGTTCCCTCGATATTCCTGGGTAGCTAAGTCTCAATTATTAGCAGTAATCTTCATTATCGTTGCCCTTGTTCAAGTTAGCTGCTTTTCTTTCAATTTTCCAACCTTCCAACCCTCGGATGAGCCAAATTTAATTTTGAGCAAGAACTCAAAAATATACCTGGACGCCATCCAAGTAACCCCTGATATTCGTGGGGAGATAAAAGATTATTCTGGCCGAGCTTTCTACAGAAGGCCATACAGACTATGGAGCAAGAGCAAAAACCAAACTGCTGAGTTTAACACCACCTTCGTGCTAAATATCAACAACCAAACTTCTCCGGGAGGTGAAGGCTTGGCCTTTATATTAACTGGAGACATCACTCTTCCAGAAAACAGTGCCGGAGAATGGCTTGGAATCGTAAATGCTACAACCAATGGCACTTCTCAACCTGGGATTTTGGCAGTAGAGTTCGACACGAGACAAAACTCCGAGGAAGGGCCCGATAACCATCTTGGTGTGAACGTCAATAGTATCAACTCCATGACGCGCGTTTCACTACCAGACTTGGGGATTACTATTTCATCGGGTATAAATGTCACGATCAGAGTTCAATATGCTGAAGATGTAATATCTGTCTTGGGTTCCATGAATGGAACTGCGAACATGAAGACTCTGCTAACTTCTCCACCTCTCAATCTATCTTCATATCTACCAGAAGAGATTTTCTTGGGTTTCTCAGCTTCAACAAGTAACTATACAGAGCTGAACTGTGTGAGAGCTTGGGAATTCTACGGTACAAGAATTGCAGATGATGATCCACAGCTGTTGTGGGTTTGGATCACAGTTCCTGCAGTACTATTGGTCATCTTAGGCGGGGTGATCTTCTTCTTGCTCTGGCAAAAGAAACGCCGTATGGAGATGTCAGACGAAGCGTACCCGAGAATAGAGGATCAGATTCAGCACAGTTCTATGGCCCCAAAGAAGTTCCGACTAGGAGAAATCAGGAAAGCAACGGGGGGATTCGGTCCTCAAAACAAGCTTGGGGAAGGTGGTTTTGGAACGGTCTACAAGGGGTTCTTGGGAGGCAACGAGGTTGCTGTGAAAAGAGTCTCCAAGGATTCACGTCAAGGCAAGCAAGAGTTCGTCGCAGAAGTGACGATAATAGGAAGTCTTCATCACAGAAATCTGGTGAAATTGATCGGGTGGTGCTATGAGAGCCGAGAACTCCTCCTTGTCTACGAGTTCATGCCTAACGGGAGCCTAGACAACTACCTATACGATGATGAGAAGCTTGGGGGCAAAGATGGATCAATATTAAGCTGGGAGACAAGACACAATGCCATATACGGGGTGGCTCAGGCACTAGACTATTTGCATAACGGATGTGAGAAAAGGGTGCTTCACAGAGACATAAAAGCCAGCAATATACTGTTGGACTCGGACTTCACTGCCAAGCTGGGAGACTTCGGACTGGCTCGTACCATTCAGAAGAGAGACGAAACTCACCACTCGACAAAAGCAATTGCAGGAACACCCGGCTACATGGCTCCAGAAACATTCCTTACAGGGAGGGCCACAGTGGAGACGGATGTGTATGCATATGGCGTTGTTGTATTACAAGTCGTGTGCGGAATGAGACAAGGGAATCTGTATTCTCAGGTGGACGAGTACAAGAATAACATAGTGCACTGGGTTTGGGAGCTTTACGAGAAGGGAAAATTACTAGCCGCAGTGGATGGTAGAATAAGAAAGGAAACAGAAGAGGAAAAGGTGGAAGATGTGCTTGTTCTGGGTTTGGCGTGTTGTCATCCAAACCCACACCACAGGCCTTCCATGAGGACTGTTATGCAGGTTCTTACGGGGGAAGCAGCTCCACCAGAAGTACCCAAGCAAAGACCTGCTTTTGTGTGGCCTGCCTTGCCTCCTTCCTTCACCCATGACACGGATAGCTCTGCTACAGGAAGCCAACTCGCTCCCTTCTTAGGAGACTTGGAGGTCACAGGCAGATGA	1992	0.4664	MFPRYSWVAKSQLLAVIFIIVALVQVSCFSFNFPTFQPSDEPNLILSKNSKIYLDAIQVTPDIRGEIKDYSGRAFYRRPYRLWSKSKNQTAEFNTTFVLNINNQTSPGGEGLAFILTGDITLPENSAGEWLGIVNATTNGTSQPGILAVEFDTRQNSEEDXPDNHLGVNVNSINSMTRVSLPDLGITISSGINVTIRVQYAEDVISVLGSMNGTANMKTLLTSPPLNLSSYLPEEIFLGFSASTSNYTELNCVRAWEFYGTRIADDDPQLLWVWITVPAVLLVILGGVIFFLLWQKKRRMEMSDEAYPRIEDQIQHSSMAPKKFRLGEIRKATGGFGPQNKLGEGGFGTVYKGFLGGNEVAVKRVSKDSRQGKQEFVAEVTIIGSLHHRNLVKLIGWCYESRELLLVYEFMPNGSLDNYLYDDEKLGGKDGSILSWETRHNAIYGVAQALDYLHNGCEKRVLHRDIKASNILLDSDFTAKLGDFGLARTIQKRDETHHSTKAIAGTPGYMAPETFLTGRATVETDVYAYGVVVLQVVCGMRQGNLYSQVDEYKNNIVHWVWELYEKGKLLAAVDGRIRKETEEEKVEDVLVLGLACCHPNPHHRPSMRTVMQVLTGEAAPPEVPKQRPAFVWPALPPSFTHDTDSSATGSQLAPFLGDLEVTGR	664

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4084g00019	664	FunFam	Probable L-type lectin-domain containing receptor kinase S.5	321	410	-	-
	Pral4084g00019	664	Pfam	Legume lectin domain	30	266	IPR001220	GO:0030246
	Pral4084g00019	664	SUPERFAMILY	Concanavalin A-like lectins/glucanases	27	270	IPR013320	-
	Pral4084g00019	664	SMART	serkin_6	336	614	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4084g00019	664	ProSiteProfiles	Protein kinase domain profile.	336	630	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4084g00019	664	FunFam	probable L-type lectin-domain containing receptor kinase S.5	411	620	-	-
	Pral4084g00019	664	Pfam	Protein kinase domain	339	612	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4084g00019	664	ProSitePatterns	Protein kinases ATP-binding region signature.	342	363	IPR017441	GO:0005524
	Pral4084g00019	664	SUPERFAMILY	Protein kinase-like (PK-like)	317	614	IPR011009	-
	Pral4084g00019	664	FunFam	Probable L-type lectin-domain containing receptor kinase S.5	28	267	-	-
	Pral4084g00019	664	Gene3D	Transferase(Phosphotransferase) domain 1	411	622	-	-
	Pral4084g00019	664	CDD	lectin_legume_LecRK_Arcelin_ConA	29	258	IPR001220	GO:0030246
	Pral4084g00019	664	CDD	STKc_IRAK	342	616	-	-
	Pral4084g00019	664	PANTHER	-	58	624	-	-
	Pral4084g00019	664	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	461	473	IPR008271	GO:0004672\|GO:0006468
	Pral4084g00019	664	Gene3D	-	27	267	-	-
	Pral4084g00019	664	Gene3D	Phosphorylase Kinase; domain 1	321	410	-	-
	Pral4084g00019	664	ProSitePatterns	Legume lectins beta-chain signature.	147	153	IPR019825	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4084g00019	Pral-Chr4084	141583	144006	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4084g00019	11	630	Receptor kinase-like Gene Family	AT5G55830	36.944	4.77e-119	369

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pral4084g00019		Pkinase	2.3e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4084g00019	-		-	gmx:100785031	957.977