Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4084g00010 ATGATGTGCTGCGGAGGAGCAGAGGAAGAGATCGCTGGCCTACCTCCAAACCAATCCACTGCACCACCAGGAGGGGTTAATGCATATGGTGGCGGAGGAGGAGAGAGAGGAGAACTCAGGGGCAATGTTGTCAAGACAGGCGGTCCACAGAGAGATTTATCGGTTGAGACACCAGCCATTTCACTGGAAGAGCTGAATAGTATAACGGACAACTTTGGTTCCAATGCTTTGATTGGAGAAGGTTCCTACGGACGGGTTTTCTACGCAAAGTTAAGAAATGGTCAGGATGCAGCCATCAAAAAGCTGGATAACAGTTCTTCACCAGAACCAGACTCTGATTTTACCGCACAGTTATCTATAGTTTCAAGACTAAAGCATGAGCATCTTTTGGAGTTGACGGGGTATTGCCTCGAGGGAACCAACAGAATTTTGGTCTATCAGTACGCAAGCAAGGGCTCTCTGCATGATATATTGCATGGAAGGAAAGGTGTACAGGGGGCTGAACCTGGTCCAACACTAAGGTGGAACCAAAGAGTAAAAATTGCATATGGTGCAGCAAAAGGCCTTGAGTTTCTTCATGAGAAGTGTCAACCGTCCATAGTTCATCGTGACGTGAGATCAAGCAATGTCTTATTGTTCGATGACTTCGAGTCCAAGATTGCTGATTTCAACTTGACAAACCAGAGTTCTGACACAGCGGCTCGGCTTCATTCAACCAGGGTCTTAGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACTGGCCAGATTACCCAGAAAAGTGATGTCTACAGTTTTGGAGTGGTGCTCTTAGAACTCCTAACAGGAAGAAAGCCAGTGGACCACACAATGCCTAAGGGGCAACAAAGTCTAGTGACGTGGGCAACTCCAAGGCTGAGTGAGGACAAAGTGAAGCAGTGTGTGGATCCGAAGCTAAACAGTGAATACCCCCCAAAGGCCGTTGCTAAGTTGGCAGCAGTTGCGGCACTTTGTGTTCAGTATGAAGCTGACTTCCGGCCAAATATGACAATAGTGGCTAAGGCTCTTCAGCCACTTCTCAATTCAAAGCCGGCTGGCTCTGAATCCGGTGCTTGA 1098 0.4772 MMCCGGAEEEIAGLPPNQSTAPPGGVNAYGGGGGERGELRGNVVKTGGPQRDLSVETPAISLEELNSITDNFGSNALIGEGSYGRVFYAKLRNGQDAAIKKLDNSSSPEPDSDFTAQLSIVSRLKHEHLLELTGYCLEGTNRILVYQYASKGSLHDILHGRKGVQGAEPGPTLRWNQRVKIAYGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFDDFESKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNSEYPPKAVAKLAAVAALCVQYEADFRPNMTIVAKALQPLLNSKPAGSESGA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4084g00010 365 ProSiteProfiles Protein kinase domain profile. 72 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4084g00010 365 SUPERFAMILY Protein kinase-like (PK-like) 54 350 IPR011009 -
Pral4084g00010 365 Gene3D Transferase(Phosphotransferase) domain 1 150 362 - -
Pral4084g00010 365 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
Pral4084g00010 365 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Pral4084g00010 365 SMART tyrkin_6 72 350 IPR020635 GO:0004713|GO:0006468
Pral4084g00010 365 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 44 358 - -
Pral4084g00010 365 Gene3D Phosphorylase Kinase; domain 1 48 148 - -
Pral4084g00010 365 FunFam PTI1-like tyrosine-protein kinase 3 150 359 - -
Pral4084g00010 365 Pfam Protein tyrosine and serine/threonine kinase 77 349 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4084g00010 Pral-Chr4084 79193 81083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4084g00010 60 362 Receptor kinase-like Gene Family AT3G58690 44.408 1.74e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pral4084g00010 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4084g00010 - - tcc:18599139 593.578