Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4084g00009 ATGATGTGCTGCGGAGGAGCAGAGGAAGAGATCGCTGGCCTACCTCCAAACCAATCCACTGCACCACCAGGAGGGGTTAATGCATATGGTGGCGGAGGAGAGAGAGGAGAACTCAGGGGCAATGTTGTCAAGACAGGCGGTCCACAGAGAGATTTATCGGTTGAGACACCAGCCATTTCACTGGAAGAGCTGAATAGTATAACGGACAACTTTGGTTCCAATGCTTTGATTGGAGAAGGTTCCTACGGACGGGTTTTCTACGCAAAGTTAAGAAATGGTCAGGATGCAGCCATCAAAAAGCTGGATAACAGTTCTTCACCAGAACCAGACTCTGATTTTACCGCACAGTTATCTATAGTTTCAAGACTAAAGCATGAGCATCTTTTGGAGTTGACGGGGTATTGCCTCGAGGGAACCAACAGAATTTTGGTCTATCAGTACGCAAGCAAGGGCTCTCTGCATGATATATTGCATGGAAGGAAAGGTGTACAGGGGGCTGAACCTGGTCCAACACTAAGGTGGAACCAAAGAGTAAAAATTGCATATGGTGCAGCAAAAGGCCTTGAGTTTCTTCATGAGAAGTGTCAACCGTCCATAGTTCATCGTGACGTGAGATCAAGCAATGTCTTATTGTTCGATGACTTCGAGTCCAAGATTGCTGATTTCAACTTGACAAACCAGAGTTCTGACACAGCGGCTCGGCTTCATTCAACCAGGGTCTTAGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACTGGCCAGATTACCCAGAAAAGTGATGTCTACAGTTTTGGAGTGGTGCTCTTAGAACTCCTAACAGGAAGAAAGCCAGTGGACCACACAATGCCTAAGGGGCAACAAAGTCTAGTGACGTGGGCAACTCCAAGGCTGAGTGAGGACAAAGTGAAGCAGTGTGTGGATCCGAAGCTAAACAGTGAATACCCCCCAAAGGCCGTTGCTAAGTTGGCAGCAGTTGCGGCACTTTGTGTTCAGTATGAAGCTGACTTCCGGCCAAATATGACAATAGTGGCTAAGGCTCTTCAGCCACTTCTCAATTCAAAGCCGGCTGGCTCTGAATCCGGTGCTTGA 1095 0.4767 MMCCGGAEEEIAGLPPNQSTAPPGGVNAYGGGGERGELRGNVVKTGGPQRDLSVETPAISLEELNSITDNFGSNALIGEGSYGRVFYAKLRNGQDAAIKKLDNSSSPEPDSDFTAQLSIVSRLKHEHLLELTGYCLEGTNRILVYQYASKGSLHDILHGRKGVQGAEPGPTLRWNQRVKIAYGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFDDFESKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNSEYPPKAVAKLAAVAALCVQYEADFRPNMTIVAKALQPLLNSKPAGSESGA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4084g00009 364 SUPERFAMILY Protein kinase-like (PK-like) 53 349 IPR011009 -
Pral4084g00009 364 Pfam Protein tyrosine and serine/threonine kinase 76 348 IPR001245 GO:0004672|GO:0006468
Pral4084g00009 364 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 43 357 - -
Pral4084g00009 364 SMART tyrkin_6 71 349 IPR020635 GO:0004713|GO:0006468
Pral4084g00009 364 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Pral4084g00009 364 Gene3D Transferase(Phosphotransferase) domain 1 149 361 - -
Pral4084g00009 364 FunFam PTI1-like tyrosine-protein kinase 3 149 358 - -
Pral4084g00009 364 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Pral4084g00009 364 Gene3D Phosphorylase Kinase; domain 1 47 147 - -
Pral4084g00009 364 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4084g00009 Pral-Chr4084 79193 81083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4084g00009 59 361 Receptor kinase-like Gene Family AT3G58690 44.408 1.39e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pral4084g00009 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4084g00009 - - qsa:O6P43_009461 596.275