Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4084g00006 ATGGACAAAGCTTCAGAGACTAGTAGTAGAGAGACTCATGACTTCATGAACGTCGATTCTTTCTCTCAGCTGCCCTTCATCCGCCCTGCCCCTCATAAAGAAAAGCCCATCAAGCTCTTCGGCATAGAATTCGGTTCCCCCGAAGCAACCGCGCCGCCGGCGGACGATTCTGAATCCGCCGAAGAATCAAATGGGAAGGACAACGCCACCATCGACAACAGCGAGACTAATCGGAGATTTGAATGCCATTACTGCTGCAGAAACTTCCCAACCTCCCAAGCCTTAGGTGGCCACCAAAACGCTCACAAACGAGAGCGCCAACACGCCAAACGAGCCCACCTTCACATGTCCGAAGCTCAAGTCTACAGCCTCGTGAACTACAGGTCCTTCCCTCCACCGACTTCAACGTTAACCACGCCAATGCCTGCTAGTACTTATCCTACTTCCGCTGCTTATAATAGTGGTGGTGCTAGGTTTTATGGAAGCCCATATTCTCTTCACCATCACCATCACCAGCCCATCAATGGAAGCCCCTTGGCCTTGTGGCGAATACCCACCCTCCAAACTAACCCTACCTTCAATAGTGACCGTTCGTTGAATCCATTGCCCTCGTTTGCTGGCGGCGAGGATATCAACATGAGGACCTCATCGCTACAGCTCGGCGGGTCTGCCTCAACGTTGCAAAACCGGTACGTCGTCCATGACTCGAAGCCGGGCGTTCAAGACCATGTGAGTTTGGATCTTCATCTGTAA 753 0.5206 MDKASETSSRETHDFMNVDSFSQLPFIRPAPHKEKPIKLFGIEFGSPEATAPPADDSESAEESNGKDNATIDNSETNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLHMSEAQVYSLVNYRSFPPPTSTLTTPMPASTYPTSAAYNSGGARFYGSPYSLHHHHHQPINGSPLALWRIPTLQTNPTFNSDRSLNPLPSFAGGEDINMRTSSLQLGGSASTLQNRYVVHDSKPGVQDHVSLDLHL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4084g00006 250 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 107 IPR013087 -
Pral4084g00006 250 MobiDBLite consensus disorder prediction 38 72 - -
Pral4084g00006 250 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Pral4084g00006 250 Pfam C2H2-type zinc finger 79 104 - -
Pral4084g00006 250 SUPERFAMILY beta-beta-alpha zinc fingers 77 108 IPR036236 -
Pral4084g00006 250 PANTHER ZINC FINGER PROTEIN GIS 1 250 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Pral4084g00006 250 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4084g00006 Pral-Chr4084 49281 50335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4084g00006 1 250 C2H2 Transcription Factor Family AT3G58070 40.580 2.08e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4084g00006 - - pcin:129307200 413.305