Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral4083g00006 | ATGTTGGAAAACATCAAAAGGGTTAGAGTTTTATGCGAGAAGGCAAAGGAGATTTTGATGGATGAAAGTAATGTCCAGCCTGTGAAAAGTCCTGTGACAATCTGTGGTGATATTCATGGACAGTTTCATGATCTAGCTGAGCTATTTCGAATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTTATGGGAGATTATGTGGACCGAGGTTATTATTCAGTGGAAACTGTAACACTCCTTGTGGCTTTGAAAGTGCGGTATCCTCAACGGATTACTATTCTTCGAGGAAACCATGAAAGTCGTCAGATTACTCAGGTTTATGGATTTTATGATGAATGCCTAAGAAAATATGGTAAAGCCATTGTTTGGAAGATCTTTACGGACCTTTTTGATTACTTTCCATTGACTGCATTGGTTGAATCGGAAATATTTTGTTTACATGGTGGACTGTCGCCATCAATTGAAACCCTTGATAATATAAGGAACTTTGATCGTGTTCAAGAGGTCCCTCATGAAGGGCCCATGTGCGATCTTTTATGGTCTGACCCTGATGACAGATGTGGCTGGGGGATTTCTCCTCGTGGTGCTGGATATACCTTTGGCCAGGATATATCTGAGCAATTCAATCACACAAACAGTCTCAAGTTGATTGCTAGAGCTCACCAGCTAGTGATGGATGGATTTAATTGGGCTCATGAACAAAAGGTGGTTACCATATTTAGTGCACCTAACTACTGTTATAGATGTGGGAACATGGCTTCCATTTTGGAGGTTGATGATTGCAAGAGCCACACATTTATCCAGTTTGAACCGGCTCCTAGGAGAGGTGAACCGGATGTCACCCGTAGGACGCCTGATTACTTCCTATAA | 870 | 0.4161 | MLENIKRVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGKAIVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKSHTFIQFEPAPRRGEPDVTRRTPDYFL | 289 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral4083g00006 | 289 | SMART | pp2a_7 | 3 | 273 | IPR006186 | GO:0016787 | |
| Pral4083g00006 | 289 | Gene3D | - | 3 | 289 | IPR029052 | - | |
| Pral4083g00006 | 289 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED | 6 | 289 | IPR047129 | GO:0004722 | |
| Pral4083g00006 | 289 | PRINTS | Serine/threonine phosphatase family signature | 93 | 117 | IPR006186 | GO:0016787 | |
| Pral4083g00006 | 289 | PRINTS | Serine/threonine phosphatase family signature | 235 | 251 | IPR006186 | GO:0016787 | |
| Pral4083g00006 | 289 | PRINTS | Serine/threonine phosphatase family signature | 31 | 58 | IPR006186 | GO:0016787 | |
| Pral4083g00006 | 289 | PRINTS | Serine/threonine phosphatase family signature | 60 | 87 | IPR006186 | GO:0016787 | |
| Pral4083g00006 | 289 | PRINTS | Serine/threonine phosphatase family signature | 157 | 184 | IPR006186 | GO:0016787 | |
| Pral4083g00006 | 289 | PRINTS | Serine/threonine phosphatase family signature | 128 | 154 | IPR006186 | GO:0016787 | |
| Pral4083g00006 | 289 | PRINTS | Serine/threonine phosphatase family signature | 213 | 233 | IPR006186 | GO:0016787 | |
| Pral4083g00006 | 289 | FunFam | Serine/threonine-protein phosphatase | 2 | 289 | - | - | |
| Pral4083g00006 | 289 | Pfam | Calcineurin-like phosphoesterase | 31 | 222 | IPR004843 | GO:0016787 | |
| Pral4083g00006 | 289 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 94 | 99 | IPR006186 | GO:0016787 | |
| Pral4083g00006 | 289 | CDD | MPP_PP2A_PP4_PP6 | 8 | 273 | - | - | |
| Pral4083g00006 | 289 | SUPERFAMILY | Metallo-dependent phosphatases | 7 | 274 | IPR029052 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral4083g00006 | Pral-Chr4083 | 43560 | 48752 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral4083g00006 | 11 | 219 | Calmodulin-binding Proteins | AT5G63870 | 34.661 | 9.62e-32 | 117 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral4083g00006 | K04382 | - | zju:107432277 | 588.571 |