Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4082g00004 ATGGCTTCTAGGGGACGAAAGAAGGCTTCTCTGCAACACAAGTTACAGCAGCTTCGAGATGTCACAAATTCTAGTGCTGTGAATAAAGCCTCAATTATTGTGGATGCATCCAAATACATAGAAGAGTTGAAGCAAAAAGTGGAGGGACTCAACGCAGAACTGGGAAGCAGCAGTACTACTAATGAAGAATCTTCATCCTCCTCCCAAAATCAATTACCTAAGGTGACAGTGGAAACCCTAGAGAGGGGTTTTCTGATAAATGTGTTTTCTGAAAGGAATTGCCCTGGAATGCTCGTCTCAATACTCGAAGCCTTTGAAGTGCTTGGACTTGAAGTGCTTGATGCTAGGGTTTCTTGTGAAGATGCCTTTCAGCTAGAAGCTGTGGGAGGAGAAAGTCAAGAGATCGATGAGAACATAGATGCACAAGTGGTGAGGCAGGCGGTGCTTCAAGCAATAAAGGACATGGAGTGA 471 0.4437 MASRGRKKASLQHKLQQLRDVTNSSAVNKASIIVDASKYIEELKQKVEGLNAELGSSSTTNEESSSSSQNQLPKVTVETLERGFLINVFSERNCPGMLVSILEAFEVLGLEVLDARVSCEDAFQLEAVGGESQEIDENIDAQVVRQAVLQAIKDME 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4082g00004 156 Gene3D - 4 69 IPR036638 GO:0046983
Pral4082g00004 156 Coils Coil 33 60 - -
Pral4082g00004 156 MobiDBLite consensus disorder prediction 52 73 - -
Pral4082g00004 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4082g00004 Pral-Chr4082 29599 31201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4082g00004 1 131 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 30.435 1.32e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4082g00004 - - ccaj:109816195 221.476