Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4081g00004 ATGGTTCTTCTTGTGTTGGTATTAGCAGTTTTTACAAACCCAGCTTTCTCCACAACACCACTATCTCCTAATTTCTATGATCAATCATGTCCCAACGCTTTAAACACAATCAAACGAGTCGTTGCGGCTGCGATTCTGAAGGAGACTCGAATGGGAGCTTCCTTGCTTCGTTTACACTTCCATGATTGCTTTGTCAATGGATGTGATGGGTCTGTTCTTTTGGATGCCACCCCAACTATTGACAGCGAGAAGAATGCACTGCCTAACTTGAATTCAGTTCGAGGATTTGAAGTTATTGATGAGATAAAGAAAGAGGTGGACCAAGCATGTGGAGGCCATGTTGTTTCGTGTGCTGACATCTTGGCTGTTGCAGCTCGTGATTCCATCGTCGCACTAGGGGGACCAAGATGGGAGGTTAACCTGGGAAGAAGAGACTCCAGAAACGCGAGCCGAGTGGATGCAAACAATAACCTACCGTCACCATTTTCGGATTTGGCTCAGCTCACAGAGAGCTTCAACAAGCAAGGGCTTGACCAGAATGACTTGGTTCTTCTATCTGCTGCGCACACCATTGGATTCGCCCGCTGTGTTACTTTTAGAAACCGCATCTACAACGACTCCAACATCGATCCCCTCTTTGCTGCACGACTCCAGTACACTGTATGCCCTAGAACTGGAGGTGACGACAACCTAGCACCGTTGGACTCAACACCTGCAATCTTTGACGGGTCTTACTTTTTGAATTTGGTTCAGAAGAAAGGAATTCTTCACTCTGATCAAGCTCTCTTCAATGGGGGTTCTACTGATGCACTGGTCAAACAGTACATCCTAAACCATCTAGATTTCTACAAGGGCTTTGCTTCTTCCATGGTTAAGATGGGAAATATAAAGCCACTCACTGGGAATGAAGGCGAGATCCGTGTCAATTGCAGAAGCGTGAACTGA 945 0.4614 MVLLVLVLAVFTNPAFSTTPLSPNFYDQSCPNALNTIKRVVAAAILKETRMGASLLRLHFHDCFVNGCDGSVLLDATPTIDSEKNALPNLNSVRGFEVIDEIKKEVDQACGGHVVSCADILAVAARDSIVALGGPRWEVNLGRRDSRNASRVDANNNLPSPFSDLAQLTESFNKQGLDQNDLVLLSAAHTIGFARCVTFRNRIYNDSNIDPLFAARLQYTVCPRTGGDDNLAPLDSTPAIFDGSYFLNLVQKKGILHSDQALFNGGSTDALVKQYILNHLDFYKGFASSMVKMGNIKPLTGNEGEIRVNCRSVN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4081g00004 314 Gene3D - 24 311 - -
Pral4081g00004 314 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 CDD secretory_peroxidase 21 313 IPR033905 GO:0004601|GO:0042744
Pral4081g00004 314 ProSiteProfiles Plant heme peroxidase family profile. 20 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 Gene3D Peroxidase, domain 2 159 293 - -
Pral4081g00004 314 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PANTHER PEROXIDASE 72-RELATED 19 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Pral4081g00004 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 FunFam Peroxidase 24 171 - -
Pral4081g00004 314 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Pral4081g00004 314 Pfam Peroxidase 38 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4081g00004 314 FunFam Peroxidase 159 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4081g00004 Pral-Chr4081 40942 42798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4081g00004 21 314 Peroxidase AT5G05340 58.586 4.70e-122 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4081g00004 K00430 - gmx:100790910 432.18