Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4080g00001 ATGTTTCAGGCTATTCGAGAAATTAACAGGAATATTGGCGAGGAGGAAAGAGTAGAATCTACTTCTCCGACCAGAGAAGAGGAGCCCGAGGGGGTTTTGTTCGGGAAGTACGAGATTGGCAGGTTTCTCGGCGTTGGAGGTTTCGCCAAGGTTTATGAAGCTTTCGATGTTGTTACGAAGCAGAGTGTGGCCATTAAGGTCGTTAGCAAGCGCAGGATAGCGGAGGCCCGCCTCACGGCGCAGGTTCAGAGGGAGATTGCGATCATGCATCGGCTGAATCATCCCAACATCGTGAAACTGTACGAGGTCCTCGCCACGAAAACTAAGATTTACTTTGTCATGGAGTGTGCTCATGGCGGCGAGCTGTACGACAGAATCCTTAATCACGGCCTCTTTGACGAAGATCACAGCCGTCGTTGTTTCCAGCAGTTAATCTCAGCCGTCCAACATTGCCATTCTCGCGGCGTGTTTCACCGCGATTTGAAGCTCGATAACCTCCTGCTCGACCAGGATTTGAACCTCAAGGTTTCGGACTTCGGGTTGAGCGCCACGACGGACCAGATCCGACCCGACGGCATGCTGCACACTCTCTGTGGGACCCCTGCTTACCTGACCCCCGAGATGCTCGCCAAGAAAGGCTACGACGGAGAGAAAGTCGATGTTTGGCAGTGCGGCGTCGTTTTGTACGTGCTCACCGTCGGGTCTTTGCCGTTCAACGAATCCAACGTGCCCACGCTGTTGAGGAGAATATACCGAGGCCAGGTTCGCATCCCCCGATGCGTGAAACCCGATTTGAAACGGTTAATCAAACGGATGCTAGACCCGAACCCGAAAACGAGGATCTCCATCGATGAGATTCTGGAAGACCCGTGGTTCAGAAAAGGTTACAGAGAGATCAAAGTCCAGCAGAAGAATCCGGAGTGGGAGGATGAGGATAGAACCAAGTCCTTGAACGCCTTCCATTTGATATCGTTCTCTTCGGGTTTGGACATGTCGGGCCTGCTCATCACCGACCCGGAACCGGAAGTTTCGGGCAGTGTGGAACGCATCGTTTCGAAGGAGACGCCGAAGAGTATCGTGGAGATGGTGGAGTCGGTGGCTGATCGGGACATAGTGACGGTGATCCGAAAACAGGACGGATGGGGAGCCAAGATTGAGGGGCATAGTGGTAATTTCGTCATACTGATCGGTGTCTACCGGCTAACGGATGAACTGGTTGTGATTGAGGTGAAGAAAAAAGAGAAAGACGAAGAAAGCGGTGCAGAATTCTGGGAAGAGAAGTTAAGGCCTCGAATTTTAGAATTAGAGTATAAACCGGAATAG 1323 0.5185 MFQAIREINRNIGEEERVESTSPTREEEPEGVLFGKYEIGRFLGVGGFAKVYEAFDVVTKQSVAIKVVSKRRIAEARLTAQVQREIAIMHRLNHPNIVKLYEVLATKTKIYFVMECAHGGELYDRILNHGLFDEDHSRRCFQQLISAVQHCHSRGVFHRDLKLDNLLLDQDLNLKVSDFGLSATTDQIRPDGMLHTLCGTPAYLTPEMLAKKGYDGEKVDVWQCGVVLYVLTVGSLPFNESNVPTLLRRIYRGQVRIPRCVKPDLKRLIKRMLDPNPKTRISIDEILEDPWFRKGYREIKVQQKNPEWEDEDRTKSLNAFHLISFSSGLDMSGLLITDPEPEVSGSVERIVSKETPKSIVEMVESVADRDIVTVIRKQDGWGAKIEGHSGNFVILIGVYRLTDELVVIEVKKKEKDEESGAEFWEEKLRPRILELEYKPE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4080g00001 440 FunFam Aurora kinase A 31 120 - -
Pral4080g00001 440 ProSiteProfiles Protein kinase domain profile. 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4080g00001 440 Gene3D Phosphorylase Kinase; domain 1 32 121 - -
Pral4080g00001 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Pral4080g00001 440 Gene3D Transferase(Phosphotransferase) domain 1 122 316 - -
Pral4080g00001 440 Pfam Protein kinase domain 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4080g00001 440 CDD CIPK_C 318 430 - -
Pral4080g00001 440 FunFam CAMK family protein kinase 32 330 - -
Pral4080g00001 440 SMART serkin_6 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4080g00001 440 SUPERFAMILY Protein kinase-like (PK-like) 33 312 IPR011009 -
Pral4080g00001 440 Pfam NAF domain 315 369 IPR004041 GO:0007165
Pral4080g00001 440 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Pral4080g00001 440 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 26 416 - -
Pral4080g00001 440 Gene3D Kinase associated domain 1, KA1 317 437 - -
Pral4080g00001 440 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4080g00001 Pral-Chr4080 19302 21021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4080g00001 32 435 CBL-interacting serine-threonine protein kinases AT2G30360 53.269 1.23e-154 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral4080g00001 Pkinase 2.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4080g00001 - K12761 fve:101291255 479.559