Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4079g00002 ATGGGGAATTATAGGTTTAGGTTATCAGATATGATCCCTAATGCTTGGTTTTACAAGCTCAGGGATATGGGGAAGAGGAAGAACCAGGCAATGGACAAGAAGAAGAAGAAGAAGAAGGAATCTTTATCTACATCGACTCCGACAACCTCAAAGACATCAAAACCAAAGCAACCCCACCAGAGCATTCCCAGAAAGTCTTACTACTTTACGAGGGAGCTGAATTGTCCAACCGATAGGATCTACACTTCACCACCTTCCTCAAACCCCAAAATTTCTGTTTCGGACACCAATTTCCCAGAAACACCCAGAAAATCCTCGTCCAAACAGAGACCTAAGAGAAGAACCACAAAAACTTCTCCGAAGCTCGTGTCTTCCTCCGTTTCTTCTGGCTGTCACTGCCGAACCACTCTCGAATCCGTTTGGACCAAGTCGGATTCCCCAGCTGACAACTCATCGTCTCCGTTTGATAGCTCTGTCGAATCAGAATTCCCAGAGCCAGAGTTCAGAACAGACCGTGTCCTGCCCACAGAGTCGTCATTTGATGATGATTGCAACAGCAGGCTAGAGTTTCACGAAAACGACATCGTAATCGACGTGGACAAGAATTCTATCGCAAGAAAAGATGATAAGCTTGATGGGTTGGATCCATTTTCCGAGCTGGAACTACCTCCGATCATAACGAAGCCAACGAAATTGAAGAAAGAAACCAGAGGAACCAAACCCAGAAACAGAGGGCGCACATTCGAAGAACAGGGGAATCTGAAAGTCAAGATTTTGAAGGAAGACCCGGCGCTGAATAGAGAACAGAGGACGCCCCAGGTTCGGAGATTCTCCGTCAGCTCGCCGGGAGTGAAGATTCGGGTGAATTCCCCGAGAATAAGTGGTAGGAAGAGTCAGGGGTATAGTGGCCGGAAAAGTGTATCTTCGTCGTCGAGGAACTCCCGGAGAAGCCTCTCCGATAGCTTTGCGGTGGTGAAGTCGTCGTTCAACCCGCAGAAAGATTTCAGAGAGTCAATGGTGGAGATGATTGTGGAAAATAATATCAGAGCATCGAAGGACTTGGAAGATCTTCTTGCTTGCTATCTCTCTCTGAATTCAGATGAGTATCACGACCTCATCATCAAAGTGTTCAAGCAGATATGGTTTGATTTGACCGACACCCATTAG 1167 0.467 MGNYRFRLSDMIPNAWFYKLRDMGKRKNQAMDKKKKKKKESLSTSTPTTSKTSKPKQPHQSIPRKSYYFTRELNCPTDRIYTSPPSSNPKISVSDTNFPETPRKSSSKQRPKRRTTKTSPKLVSSSVSSGCHCRTTLESVWTKSDSPADNSSSPFDSSVESEFPEPEFRTDRVLPTESSFDDDCNSRLEFHENDIVIDVDKNSIARKDDKLDGLDPFSELELPPIITKPTKLKKETRGTKPRNRGRTFEEQGNLKVKILKEDPALNREQRTPQVRRFSVSSPGVKIRVNSPRISGRKSQGYSGRKSVSSSSRNSRRSLSDSFAVVKSSFNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDTH 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4079g00002 388 MobiDBLite consensus disorder prediction 24 42 - -
Pral4079g00002 388 Pfam Transcriptional repressor, ovate 328 384 IPR006458 -
Pral4079g00002 388 MobiDBLite consensus disorder prediction 24 128 - -
Pral4079g00002 388 MobiDBLite consensus disorder prediction 76 104 - -
Pral4079g00002 388 Pfam DNA-binding domain 1 42 IPR025830 GO:0003677
Pral4079g00002 388 MobiDBLite consensus disorder prediction 142 159 - -
Pral4079g00002 388 Coils Coil 20 40 - -
Pral4079g00002 388 ProSiteProfiles OVATE domain profile. 324 383 IPR006458 -
Pral4079g00002 388 MobiDBLite consensus disorder prediction 43 64 - -
Pral4079g00002 388 MobiDBLite consensus disorder prediction 231 269 - -
Pral4079g00002 388 NCBIfam uncharacterized plant-specific domain TIGR01568 322 385 IPR006458 -
Pral4079g00002 388 MobiDBLite consensus disorder prediction 271 314 - -
Pral4079g00002 388 MobiDBLite consensus disorder prediction 142 170 - -
Pral4079g00002 388 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 40 385 IPR038933 GO:0045892
Pral4079g00002 388 MobiDBLite consensus disorder prediction 231 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4079g00002 Pral-Chr4079 22885 24376 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral4079g00002 Ovate 3.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4079g00002 - - aprc:113863721 376.711