Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4078g00019 ATGAGGTGCTTCTCTGTCTTGAAATGTAAAAAGAAAAAGTTCGAACAGATGATCCCTATAAAACATGTCAATCATAAAGAGCATGGAGTAGCAACCGTATTGCCTCAATCTCGAACTCATACTAGATCATTGCAGTCTGCACCTCCTAGTTTCAAGACACGAGTGAAACCCATTCAACCTGTTAATAAAATCACAAAAAATAGAATACGAGCATTATCTGCTCCTTCAACTCTGGATGCAGCTGAACAAGATGCTTTGGTGTCAGTTGAGTATGAAGAACAAGAAGAGTCAAAACACCCAGCTGGATTGATGAAGGAACAGCGTGTATCCACTTCACAACCCTTACCTCTTCCATCTCCTCAGGGTGGTGTTGCATTGAAGGCTACCAGTAGCTTTAAGTTAGGGACAGCTAGTGGTCCTCTATATGCTTCTGGACCTTTGCCACTGCCACCAACTGGTTCCCTACGGAACTTTCCCTTTGAGGATATTGCTGCTGCTTGCCACAATTTCTCTTCAGATCGATTCATGTCAGAGAGTCTTTCTTCTACAATGTATAAAGCTTCCTTTGGTGATGATGCTTCTAGTTCAAAAACTTTTGATGCCACTGTCACCCGTCTTCACCCTTCCACTCAGGCCTTGAAGGAATTCATAAATGAGGTTAACACTATTGCATCTTTGCAACATCCAAACCTCTGCAAATTGCTAGGTTTTCATGCTCGCGAGGGTTCAGAACGGAGAATGTTGGTTTATGAAAGGCTCTTTCATGGAAGCTTGGACCGCTTGTTGTATGGGAGATCTGATGGGCCACCACTTGATTGGAATACAAGAATGAGAATTGCTTTGTGTGCTGCCCAAGGTCTTACTTTCTTGCATGAAGAAGGGCCCTTCCAGGCAATGTATAACGAGTTTTCTACAGCCAACATACAGATTGACAAAGATTTTAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGGCATATTCCTGAAGAAGAGATTCCAAGCAGTTCGTCGGCTGTGGGAAACCTATCAGTGGAGACACTGGAAAGACGGTTGCTAACTCCGAAGAGCAACGTTTGGAGCTTTGGCATTTTTCTTCTAGAATTACTGACCGGAAGAAAGAATCTGGATAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGTTGGCCCTTCCTGGCCGACGATTGTCGACTGTCCTTGATCATGGATCCTCAACTGAAAGGTCGCTTTCCTTCCAAAGCAGCAAGGACAATAGCTGATATTGCACTAAAATGCCTTCAGAAGGAGCCTTCAGAAAGACCCACTATGAGAATTGTTGTTGAGCATCTTAAAATGGTACAGGATATGAAGTACTCTCTCCGGTTTCCTCTGCAAGAGCCTGCTGCAATTTCTGGAAAACAGATGTCAAGATCGCCAAGTCTTAATGGCATCGTCTGTCCCCAGCCTAGAATGAGTTTCTCTCCATCACCACCACTGCCATCAGGAGCGCAGCCATCTGGTTCACCTCCAAGATGGTCTGGTGGGCCCAACTTGCTTCCCTTGCGAGGGTGTTCCTCTATGCTTTCTTTGGATGAGCTTGATCGGCAGTTAAGCCAGAAGTCGTCTTCCTCAGCATCTAGGAGGGCTAGTGTTGTAGGATATTGA 1650 0.4497 MRCFSVLKCKKKKFEQMIPIKHVNHKEHGVATVLPQSRTHTRSLQSAPPSFKTRVKPIQPVNKITKNRIRALSAPSTLDAAEQDALVSVEYEEQEESKHPAGLMKEQRVSTSQPLPLPSPQGGVALKATSSFKLGTASGPLYASGPLPLPPTGSLRNFPFEDIAAACHNFSSDRFMSESLSSTMYKASFGDDASSSKTFDATVTRLHPSTQALKEFINEVNTIASLQHPNLCKLLGFHAREGSERRMLVYERLFHGSLDRLLYGRSDGPPLDWNTRMRIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEIPSSSSAVGNLSVETLERRLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSWPFLADDCRLSLIMDPQLKGRFPSKAARTIADIALKCLQKEPSERPTMRIVVEHLKMVQDMKYSLRFPLQEPAAISGKQMSRSPSLNGIVCPQPRMSFSPSPPLPSGAQPSGSPPRWSGGPNLLPLRGCSSMLSLDELDRQLSQKSSSSASRRASVVGY 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4078g00019 549 MobiDBLite consensus disorder prediction 486 500 - -
Pral4078g00019 549 MobiDBLite consensus disorder prediction 530 549 - -
Pral4078g00019 549 MobiDBLite consensus disorder prediction 466 484 - -
Pral4078g00019 549 Pfam Protein tyrosine and serine/threonine kinase 199 445 IPR001245 GO:0004672|GO:0006468
Pral4078g00019 549 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4078g00019 549 PANTHER OS01G0588500 PROTEIN-RELATED 106 449 - -
Pral4078g00019 549 Gene3D Transferase(Phosphotransferase) domain 1 254 457 - -
Pral4078g00019 549 Gene3D Phosphorylase Kinase; domain 1 151 251 - -
Pral4078g00019 549 SUPERFAMILY Protein kinase-like (PK-like) 149 458 IPR011009 -
Pral4078g00019 549 MobiDBLite consensus disorder prediction 464 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4078g00019 Pral-Chr4078 271064 274956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4078g00019 149 449 Receptor kinase-like Gene Family AT4G02010 35.831 1.87e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Pral4078g00019 PK_Tyr_Ser-Thr 7.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4078g00019 - - gmx:100809117 847.425