LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4078g00014	ATGTTTTCTTCTACTTCATGTCATACTCATCCCTTATTGCTAGCTTCCATCTTCATAGCTCTCACCTTTTACTACCCCACATCATCAAATGCTCAGCTCACCTCCACTTTCTATTCCACATCTTGCCCCAACGCCTCTTCCATTGTCACTAATGCAGTTCAGCAGGCTCTCCAATCTGATCCTCGTATAGGAGCCAGCCTCATTCGTCTCCATTTCCACGACTGCTTTGTAAATGGATGCGACGGGTCCATTTTGTTGGACGTGGGTGGCAACATTACACTGAGCGAGAAAAATGCAGCGCCCAACAACAATTCCGCCAGGGGATTTGGAGTTGTTGACAACATCAAGAGCGCTCTAGAAAATTCATGCCCTGGTGTTGTTTCTTGTGCTGATATTCTTGCTCTTGCGGCTGAAGCTTCTGTGTCTTTGTCAGGAGGTCCTTCATGGACTGTTCTACTTGGAAGAAGGGACGGTCTGACGGCCAACCAAGCTGGTGCCAATACAGCTATTCCCAGCCCAGTCGAAAGCCTCGCCAACATCACAAACAAGTTCTCTGCCGTTGGTTTAAACACAAATGATGTGGTTGCGCTATCTGGTGCACATACTTTTGGTCGTGCCCAATGTCGATTCTTCAGCAACCGACTGTTCAACTTTAATGGAAGTGGCAACCCCGATCCGACACTGAACACGACCTACCTTGCAACTCTGCAGCAAAACTGTCCACAAAATGGAAACGGGTCTACTCTGAACAACCTTGACCCTTCGTCCCCAAACACGTTTGATAACAACTACTACAAGAATCTTCTGATGAATCGGGGGCTTCTGCAATCAGACCAAGAGTTGTTTTCAACAAATGGGTCTTCTACAGTGTCCATTGTTAACAATTTTGCCAACAACCAAACAGCCTTCTTCCAAGCGTTTGCTCAGTCAATGATAAATATGGGTAATATTAGCCCATTAACGGGAAGCCAGGGAGAAATCAGATCCAACTGCAGAAAAGTCAATGGAAGCTAA	1014	0.4625	MFSSTSCHTHPLLLASIFIALTFYYPTSSNAQLTSTFYSTSCPNASSIVTNAVQQALQSDPRIGASLIRLHFHDCFVNGCDGSILLDVGGNITLSEKNAAPNNNSARGFGVVDNIKSALENSCPGVVSCADILALAAEASVSLSGGPSWTVLLGRRDGLTANQAGANTAIPSPVESLANITNKFSAVGLNTNDVVALSGAHTFGRAQCRFFSNRLFNFNGSGNPDPTLNTTYLATLQQNCPQNGNGSTLNNLDPSSPNTFDNNYYKNLLMNRGLLQSDQELFSTNGSSTVSIVNNFANNQTAFFQAFAQSMINMGNISPLTGSQGEIRSNCRKVNGS	337

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4078g00014	337	FunFam	Peroxidase	36	187	-	-
	Pral4078g00014	337	SUPERFAMILY	Heme-dependent peroxidases	32	335	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Pral4078g00014	337	ProSiteProfiles	Plant heme peroxidase family profile.	32	335	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pral4078g00014	337	CDD	secretory_peroxidase	32	334	IPR033905	GO:0004601\|GO:0042744
	Pral4078g00014	337	Gene3D	-	37	335	-	-
	Pral4078g00014	337	FunFam	Peroxidase	171	314	-	-
	Pral4078g00014	337	Gene3D	Peroxidase, domain 2	171	314	-	-
	Pral4078g00014	337	PANTHER	PEROXIDASE 72-RELATED	30	334	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Pral4078g00014	337	Pfam	Peroxidase	50	299	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pral4078g00014	337	ProSitePatterns	Peroxidases proximal heme-ligand signature.	193	203	IPR019793	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4078g00014	Pral-Chr4078	188771	190355	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4078g00014	12	337	Peroxidase	AT5G06720	75.153	2.24e-177	493

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4078g00014	K00430		-	gmx:100783115	530.791

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