Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4078g00011 ATGCTATGCTTTCTTCTGCACCATTTCTGCGTTTTTGTGTCTGAATATCTCTCTCTGAAAATGCATTTGGGCTATTTCCTGTTTCTTCTTTTTGCTCCAATCCTGGTCATCTCTACCGACCCGGGGTTCACCGATGATGTCTTGGGGTTGATTGCGTTCAAAGAGGGTCTAAAAGACCCGAAAGCTGTGCTCTCTAGTTGGAACGAAGATGATGAAAGTCCCTGTAATTGGGTCGGGGTCAAATGCGACCCGACGACCCGTAGGGTCTCTGCTTTAGTCCTTGACGGGTTTTCTCTTTCCGGGCATATTGATCGAGGGTTGATGAGATTGCAGTTCCTGCAAGTTCTATCACTTTCTAGAAATAACTTCACAGGGAGCATCATCCCTGATCTTCCTCGCCTATGGAGCTTGCAACTCGTTGATTTGAGCGAGAACAATCTCTCTGGACCAATCCCACAAGAATTTTTCCAGCAATGTGGGTCTTTAAGAGCAGTTTCGTTTGCCAGAAACAATCTTTCCGGTAAAATTCCTGATTCTCTGAGCTCTTGCTCAATGTTAGCTACTGTTAACTTCTCCCAGAATCAACTTTCTGGAGAATTACCCTCTGGGATATGGTACTTGAGGGGATTACAGTCACTTGATCTGTCCAATAACTTGCTAGAAGGAGAGATTCCTGAGGGAATTGAGAACCTGAATGATTTGAGAGAGTTAAGTCTGCAGAAGAATCGATTAATCGGTAGGCTTCCTGAGGGTATTGGAGGTTGCTTGCTCTTGAAATTACTTGATTTCAGTGATAATTTTCTCTCTGGGAGACTTCCTGACTCATTGCAGAAACTCAGCTCATGCACAACTCTCAGTTTACAGGGGAATTCATTCGCAGGAGGCATCCCTGACTGGATTGGAGAGTTGAAAAATCTGGAGATATTGGACCTTTCTGCAAATGCATTCTCAGATTGGATTCCTAAATCAATAGGAAATCTTGATTCCCTGAACAAATTAAATCTATCAAGGAATCAACTTACAGGAAACTTGCCTGACTCAATGAGCAGCTGCATTAAGCTCTTGGCTCTTGACATGAGCCACAATCAGTTGTCAGGCCACATTCCTTCGTGGATTTTTAAGATGGGTTTAAAAAGTATTTCACTTTCATGGAACAACTTCACTAAGGGCAATATTCCTTCGCTTTCATCCACACCAACGTCTTATTATGGCCTCCAGGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGGTCTTCCATCTAGCATTGGGGGTCTCAGTAGCTTGCAAGTCTTAAACATGTCCACCAATCATATCTCTGGTGCTATTCCAGTGAGTATAGGAGAGCTTAAATCTTTGTTCATTCTTGACCTAAGTGGCAACAAGATTAATGGAAGCATTCCTTCTGAAATAGAAGGGTTGATGTCATTGAGTGAACTGAGACTGCAGAAGAATTTCCTGAGTGGAAGAATTCCAACTCAAATTGATAAGTGTTCATCCCTGACAGCTCTGAATCTTTCTCACAACAAGCTTACTGGTTCAATCCCTTCAGCCATAGCAAACTTATCCAATCTTCAACACATAGACTTGTCATGGAATGAACTCTCTGGAAGCTTACCAAAGGAGCTGACAAATCTTTCCCACCTTTTTTCCTTTAATGTTTCCTACAACCACCTTCACGGTGAGCTACCAGTGGGGGGCTTCTTCAATACTATCTCTCCCTCATCTGTCTCTGCCAATCCATTGTTATGTGGTTCCATTGTTAATCACTCCTGCCCATCTGTTCATCCTAAACCAATTGTCCTTAACCCAAACTCTTCTGGCTCAAATTCTGGCCCTTCCTCTCAAAACCGTCGTCATAAGAAGGTCATTCTCAGTATCTCTGCCCTTATTGCTATTGGAGCTGCTGCTCTTATCACCATTGGTGTGGTGGCTGTTACACTGCTAAATATGCATGCACGTCACTCAATGTCACGTTCTGCTGCGCCATTTGCATTATCCGGTGGTGAAGAGTATAGTTGTTCGCCCCAAAAAGATCCAAACTATGGCAAACTTGTGATGTTTACTGGAGAAGCTGAATTTGCTGATGGGGCTCATAATCTTCTCAATAAAGACAATGAGATTGGTCGTGGCGGATTTGGAGTTGTTTATCGCACTATTCTTCGAGATGGGCGTTCTGTTGCAATCAAGAAGCTTACTGTCTCTAGTCTGGTCAAATCCCAAGAGGACTTTGAGAGGGAAGTGAAAACACTTGGGAAGATGAGGCACCAGAATCTAGTGGCACTTGAAGGTTACTACTGGACTTCATCCTTGCAGCTTCTGATCTATGAGTACCTATCCAGAGGAAGTTTACATAAGCTGCTACATGATGAAAATACGAAAGACATGCTGTCGTGGCGACAAAGGTTCAAGATTATGCTCGGCATGGCAAAAGGGTTAGCCCATTTGCACCAAATGAACATAATTCACTACAATCTGAAATCAACAAATGTTCTAATTGACTGCTCTGGTGAGCCAAAAATAGGAGATTATGGCTTGGTGAGGCTATTACCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCGCTCGGATATATGGCTCCTGAGTTTGCTTGCCGCACAGTGAAGATAACCGAGAAATGTGATTTATACGGGTTTGGGATCCTAGTTCTGGAGATAGTGACTGGAAAAAGACCTGTGGAGTATATGGAGGATGATGTGGTTGTTCTGTGTGACATGGTAAGAGGAGCATTGGAGGAGGGAAAGGTGGATCAGTGTATTGATCCAAGGCTTCTGGGAAATTTTGCCGCAGAAGAAGCAATTCCTGTGATAAAATTAGGGTTAATCTGTGCATCACAGGTGCCATCAAACCGTCCAGACATGGCTGAAGTAGTCAACATATTAGAGTTGATACAGTGCCCTTCTGAAGGACAAGAGGAAATAGAATGA 2958 0.4317 MLCFLLHHFCVFVSEYLSLKMHLGYFLFLLFAPILVISTDPGFTDDVLGLIAFKEGLKDPKAVLSSWNEDDESPCNWVGVKCDPTTRRVSALVLDGFSLSGHIDRGLMRLQFLQVLSLSRNNFTGSIIPDLPRLWSLQLVDLSENNLSGPIPQEFFQQCGSLRAVSFARNNLSGKIPDSLSSCSMLATVNFSQNQLSGELPSGIWYLRGLQSLDLSNNLLEGEIPEGIENLNDLRELSLQKNRLIGRLPEGIGGCLLLKLLDFSDNFLSGRLPDSLQKLSSCTTLSLQGNSFAGGIPDWIGELKNLEILDLSANAFSDWIPKSIGNLDSLNKLNLSRNQLTGNLPDSMSSCIKLLALDMSHNQLSGHIPSWIFKMGLKSISLSWNNFTKGNIPSLSSTPTSYYGLQVLDLSSNAFSGGLPSSIGGLSSLQVLNMSTNHISGAIPVSIGELKSLFILDLSGNKINGSIPSEIEGLMSLSELRLQKNFLSGRIPTQIDKCSSLTALNLSHNKLTGSIPSAIANLSNLQHIDLSWNELSGSLPKELTNLSHLFSFNVSYNHLHGELPVGGFFNTISPSSVSANPLLCGSIVNHSCPSVHPKPIVLNPNSSGSNSGPSSQNRRHKKVILSISALIAIGAAALITIGVVAVTLLNMHARHSMSRSAAPFALSGGEEYSCSPQKDPNYGKLVMFTGEAEFADGAHNLLNKDNEIGRGGFGVVYRTILRDGRSVAIKKLTVSSLVKSQEDFEREVKTLGKMRHQNLVALEGYYWTSSLQLLIYEYLSRGSLHKLLHDENTKDMLSWRQRFKIMLGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKIGDYGLVRLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDLYGFGILVLEIVTGKRPVEYMEDDVVVLCDMVRGALEEGKVDQCIDPRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVVNILELIQCPSEGQEEIE 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4078g00011 985 Gene3D Ribonuclease Inhibitor 46 199 IPR032675 -
Pral4078g00011 985 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 696 778 - -
Pral4078g00011 985 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 323 596 - -
Pral4078g00011 985 SUPERFAMILY L domain-like 70 322 - -
Pral4078g00011 985 Pfam Leucine rich repeat N-terminal domain 45 83 IPR013210 -
Pral4078g00011 985 Gene3D Ribonuclease Inhibitor 305 595 IPR032675 -
Pral4078g00011 985 Gene3D Transferase(Phosphotransferase) domain 1 779 983 - -
Pral4078g00011 985 ProSiteProfiles Protein kinase domain profile. 702 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4078g00011 985 SUPERFAMILY Protein kinase-like (PK-like) 702 975 IPR011009 -
Pral4078g00011 985 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 44 322 - -
Pral4078g00011 985 CDD STKc_IRAK 708 974 - -
Pral4078g00011 985 SMART LRR_typ_2 546 570 IPR003591 -
Pral4078g00011 985 SMART LRR_typ_2 522 545 IPR003591 -
Pral4078g00011 985 SMART LRR_typ_2 303 326 IPR003591 -
Pral4078g00011 985 SMART LRR_typ_2 231 255 IPR003591 -
Pral4078g00011 985 SMART LRR_typ_2 450 474 IPR003591 -
Pral4078g00011 985 SMART LRR_typ_2 426 448 IPR003591 -
Pral4078g00011 985 SMART LRR_typ_2 207 230 IPR003591 -
Pral4078g00011 985 SMART LRR_typ_2 327 351 IPR003591 -
Pral4078g00011 985 SMART LRR_typ_2 110 137 IPR003591 -
Pral4078g00011 985 SMART LRR_sd22_2 231 254 - -
Pral4078g00011 985 SMART LRR_sd22_2 207 230 - -
Pral4078g00011 985 SMART LRR_sd22_2 303 329 - -
Pral4078g00011 985 SMART LRR_sd22_2 522 548 - -
Pral4078g00011 985 SMART LRR_sd22_2 450 476 - -
Pral4078g00011 985 Pfam Leucine rich repeat 500 559 IPR001611 GO:0005515
Pral4078g00011 985 Pfam Protein kinase domain 703 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4078g00011 985 ProSiteProfiles Leucine-rich repeat profile. 500 523 IPR001611 GO:0005515
Pral4078g00011 985 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 275 397 IPR046959 -
Pral4078g00011 985 Gene3D Phosphorylase Kinase; domain 1 680 778 - -
Pral4078g00011 985 Gene3D Ribonuclease Inhibitor 200 299 IPR032675 -
Pral4078g00011 985 SUPERFAMILY RNI-like 272 570 - -
Pral4078g00011 985 Pfam Leucine Rich Repeat 258 279 IPR001611 GO:0005515
Pral4078g00011 985 Pfam Leucine Rich Repeat 210 231 IPR001611 GO:0005515
Pral4078g00011 985 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 779 980 - -
Pral4078g00011 985 ProSitePatterns Protein kinases ATP-binding region signature. 708 731 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4078g00011 Pral-Chr4078 121496 125264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4078g00011 25 984 Receptor kinase-like Gene Family AT3G56370 60.622 0.0 1125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pral4078g00011 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4078g00011 - - gmx:100790365 1555.81