Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4078g00001 ATGAGTGGTTCAGTTATGGAGAATCTGGCAATGAAGGAGCTAGAGAGAGGGCGTGAACTTGCTAACCAGCTTCGACGACTGATCTTTAGGTCTGAGGATGGAGAAGATGATCATAAGACTAAGGGCTTAACGACGTCGTCTGCTGAGGATCTTGCTGCGAAAGTGCTGGATTCTTTCGCCAACACACTCTCTCTCTTCAACTCAAATCGCCATGTTTCTGCAGATCCCTCCTTGTCTTCCTTCTGTCCCTTGCCTGCTCACTCTGGTGACTCTCAGGAGAGCTCTAAGACCAGAAGCACCTCCACCACCATTAAAGATCCAACAAGATGCACTCCCAAGAAAAGGAAAAGTAGTGCCCAGACATGGGAGGAGGACACCAAAATGGGTCCAAAGGAAGATGGGCATGCGTGGAGGAAATATGGCCAAAAAACAATACTCGATTCTAAACACCCCAGGAACTACTTCAGATGCACTCACAAGTATGACCAAGGATGTGAAGCAACAAAACAAGTTCAGAAAATCCAAGACGATCCTCCTCTTTACAGAACCACCTATTTTGGCCACCATACTTGCACCAACCTCCTTAATCCTCAGGCCTTTCTTGATTCCCATGATGACCTTAATTCAACCTCTGCTTTTATTCTCAGCTTCAACAATAATATTATTACCACTACCTTTGACCAAAAGCTCAAAATCAACAATGATTCCTGCTCTTTATTTCCATCTGCTGGTTCTTCTGTCAAAAACGAGGATGATCAGCACTGCCACATCAGCAACATCGTCAAGCAAGAGAAAAACAATTACAATGATAATGTTAATGTTGTTCCTTCATGTTCATCCAATAATGATTGTTGCCTTGTGTTTCGTGATGAAGAAGAAGCAGTTCTTCCTTTTGGATTTGGTGGTGATGAAGTGGATGCGCTTAATTCTGCTGTACTTTATGATCCTCTCGTGTTTGAAGATCCCTTCTTATTTCAGATGATTTGA 987 0.4326 MSGSVMENLAMKELERGRELANQLRRLIFRSEDGEDDHKTKGLTTSSAEDLAAKVLDSFANTLSLFNSNRHVSADPSLSSFCPLPAHSGDSQESSKTRSTSTTIKDPTRCTPKKRKSSAQTWEEDTKMGPKEDGHAWRKYGQKTILDSKHPRNYFRCTHKYDQGCEATKQVQKIQDDPPLYRTTYFGHHTCTNLLNPQAFLDSHDDLNSTSAFILSFNNNIITTTFDQKLKINNDSCSLFPSAGSSVKNEDDQHCHISNIVKQEKNNYNDNVNVVPSCSSNNDCCLVFRDEEEAVLPFGFGGDEVDALNSAVLYDPLVFEDPFLFQMI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4078g00001 328 SUPERFAMILY WRKY DNA-binding domain 128 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4078g00001 328 Gene3D WRKY domain 115 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4078g00001 328 MobiDBLite consensus disorder prediction 84 107 - -
Pral4078g00001 328 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 205 IPR044810 GO:0003700
Pral4078g00001 328 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4078g00001 328 MobiDBLite consensus disorder prediction 83 135 - -
Pral4078g00001 328 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4078g00001 328 MobiDBLite consensus disorder prediction 108 135 - -
Pral4078g00001 328 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4078g00001 Pral-Chr4078 16073 17941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4078g00001 10 207 WRKY Transcription Factor Family AT3G56400 38.235 2.83e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4078g00001 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4078g00001 - - pcin:129291554 338.191