Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4076g00002 ATGCTGTGTCCAAGATTATATGGATTTGGCCTGGCTTTTTCGTTTTGCTGTTTCATTCTCACAGCAGCAGCACAAAAGACAGATCCTTCGGAAGTGAATGCACTCGTCCAAATCAAGAAAAGTTTGATTGATCCCAAGAACCATCTGAGGAACTGGAACAAGGGCGACCCATGTAGATCAAACTGGACTGGTGTTTGGTGTTTTGATAAAGCTGGGACTGATGGATACTCCCATGTCCATGAGCTTTACTTAATGACTTCGAATTTCTCGGGAAGTCTAGCACATCAGCTGGGTCAGCTATCTCGGCTTTGGATACTGAATTTCATGTGGAATGATCTGACAGGCACCATACCGAAGGAGATAGGAAATATCAAATCATTGAAACTCTTACTCCTGAATGGCAATAAGCTATCGGGTGCTTTGCCAGATGAACTTGGCAATCTCTTAAACTTGAATAGGTTCCAAGTTGACCAGAACCAATTGTCAGGTCCAATACCACAATCGTTTGGCAACATGGTCAATGTTAAACATCTCCACTTGAACAACAACTCATTTACTGGTCAAATTCCACGTGAACTTTCAAAGCTAAACAATCTACTGCATTTGCTTGTGGACAATAACAACTTCTCTGGCCATCTTCCACCAGAATTTTCCATGTTGCCGGCATTGCGCATACTCCAAGTGGATAACAATAATTTCGGTGGAACAGAAATTCCTTCAACCTATGCAAACTTTTCCAAGCTAGTAAAACTAAGTCTTAGAAACTGCAGCTTGCAAGGAGCTGTTCCTGATCTGAGTTCGATAAAGGAGCTTACATATTTGGATCTTAGCTGGAATCATCTTAGTGGACCCATACCAGCCAAGAAACCTGCAGATAATATGACAACTATTGACCTATCAAATAACAAGATCAACGGATCTATTGCTGAAAGCTTCAAATTACTTCCTTTGCTTCAAAAATTGTCACTAGCGAACAATTCTTTGTCCGGATCCATCCCTGCTAGTATATGGCTGAATATGTCCTTCAGTAGGACTGCTAAGCTCACAATTGATCTCCGCAATAACTCATTTTCAGACATTTTAGGCAATTCAAGTCTACCAGCAAATGTCACCTTGAGGCTTGCTGGCAATCCTATCTGCAAGAATTCTAACATTCAAAATATTGGTCAATATTGTGCCTCTGATGGGGTTGAATCTGACGAACCTATGAATTCAACAACTTCCTGCCCTGCTCAAGCTTGTCCAACGGATGATTTCTATGAATATGTCCCAGCTTCTCCTGTTCCCTGCTATTGTGCAGCACCTCTGAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCTTACTTCTCTCCTTATAGAACTTATTTTGAGTCGTATCTGACTCAGTCCTTAGATATGGACCTACACCAAGTATGGATAGATTCAATTGCTTGGGAAGCAGGACCTCGTCTCAGGATGTATTTGAAACTTTATCCTAATTACAATGATTCCCACTCTAATAAGTTCAATACAAGTGAGGTCCGGCATCTTCAAGCAAAATTTGGATCATGGAATTTTCCTCGCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTTCTTGGACCTTATGAACATCTAATTGCTGAGACAGGTAAGAGGAAGATCAGTACAACTGTGTTAGTAGTTGCCATAATTGCAGCTATTGCTTGTGCTACCGCAGTCTCTGCAATTGTCACTCTCGTCCTAGCCAAAAGACATATCAAATACCGTTCCAAACTATCCAGGAACCATATGTCCTCTAATATTTCCATCAAAATTGATGGCGTGAAAGCATTCACTTTCAAGGAACTGGCTCATGCGACTGATAATTTCAGCAGTTCAGCTATAGTTGGCCAAGGAGGTTATGGGAAGGTGTATAAAGGCATTCTGTCAGATAAAACAGTTGTGGCCATAAAGCGAGTAGATGAAGGTTCTTTACAAGGCCAAAAAGAATTTTTGACTGAGATTGAACTTCTGTCAAGGTTACATCATCGAAATCTAGTCTCATTGGTCGGATACTGCAATGAAGAAGGAGAGCAGATTCTGGTTTACGAATTCATGCCTAATGGTACCTTGCGGGAGTGGATTTCTGGCAAAAGGAAGGGAAACCTGAACTTTGGTATGAGGTTGAGGGTTGCAATGGGTGCCTCCAAAGGCATACTGTATCTCCACACTGAGGCTAACCCTCCTATCTTCCACCGAGATATAAAAGCTAGCAACATACTTCTGGACCGCACGCTGGTTGCTAAAGTGGCTGACTTTGGACTCTCACGTCTTGCACCAAATATGGATGACGAAGGAAACACGCCTAAATATGTGTCAACAGTTGTGAGAGGAACACCTGGATACCTAGATCCTGAGTACTTTTTGACTCATAAGTTAACGGACAAAAGTGATGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTCTGACAAGCATGCAACCAATATCTCATGGAAAAAACATTGTTCGTGAGGTTAGTGAAGCTCGTCAGTGTGGCACAATATCGTCCATTATAGATAGCAAAATTGGTTCCTATCCATTAGATTGTGCGGAGAAGTTTCTGAATCTTGCCCTCAGTTGTTGCCATGAGGATCCAGAGGAGAGACCATCCATGGCAGATGTGGTGAGGGAGCTTGAGATTATGCTTTCAATGTTGCCAGATTCTGAAACTGCTTTCCCAGACAATGCTTCTGATTTTCCTATTAAAATGGCTTCATCATCATCAACATCATCAACATCCTACATGGCAAGGGATGGCCAAAACATAACCTCTCCCATGTTGTCAGGAAGCAACCTTGTCAGTGATGTTATTCCCACCATTGCTCCTCGTTAG 2868 0.4191 MLCPRLYGFGLAFSFCCFILTAAAQKTDPSEVNALVQIKKSLIDPKNHLRNWNKGDPCRSNWTGVWCFDKAGTDGYSHVHELYLMTSNFSGSLAHQLGQLSRLWILNFMWNDLTGTIPKEIGNIKSLKLLLLNGNKLSGALPDELGNLLNLNRFQVDQNQLSGPIPQSFGNMVNVKHLHLNNNSFTGQIPRELSKLNNLLHLLVDNNNFSGHLPPEFSMLPALRILQVDNNNFGGTEIPSTYANFSKLVKLSLRNCSLQGAVPDLSSIKELTYLDLSWNHLSGPIPAKKPADNMTTIDLSNNKINGSIAESFKLLPLLQKLSLANNSLSGSIPASIWLNMSFSRTAKLTIDLRNNSFSDILGNSSLPANVTLRLAGNPICKNSNIQNIGQYCASDGVESDEPMNSTTSCPAQACPTDDFYEYVPASPVPCYCAAPLRIGYRLKSPSFSYFSPYRTYFESYLTQSLDMDLHQVWIDSIAWEAGPRLRMYLKLYPNYNDSHSNKFNTSEVRHLQAKFGSWNFPRTDFFGPYELLNFTLLGPYEHLIAETGKRKISTTVLVVAIIAAIACATAVSAIVTLVLAKRHIKYRSKLSRNHMSSNISIKIDGVKAFTFKELAHATDNFSSSAIVGQGGYGKVYKGILSDKTVVAIKRVDEGSLQGQKEFLTEIELLSRLHHRNLVSLVGYCNEEGEQILVYEFMPNGTLREWISGKRKGNLNFGMRLRVAMGASKGILYLHTEANPPIFHRDIKASNILLDRTLVAKVADFGLSRLAPNMDDEGNTPKYVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTSMQPISHGKNIVREVSEARQCGTISSIIDSKIGSYPLDCAEKFLNLALSCCHEDPEERPSMADVVRELEIMLSMLPDSETAFPDNASDFPIKMASSSSTSSTSYMARDGQNITSPMLSGSNLVSDVIPTIAPR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4076g00002 955 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Pral4076g00002 955 FunFam Leucine-rich repeat protein kinase family protein 585 696 - -
Pral4076g00002 955 Gene3D Ribonuclease Inhibitor 190 289 IPR032675 -
Pral4076g00002 955 Gene3D Transferase(Phosphotransferase) domain 1 697 905 - -
Pral4076g00002 955 SMART serkin_6 621 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4076g00002 955 Pfam Protein kinase domain 623 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4076g00002 955 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 29 190 - -
Pral4076g00002 955 ProSiteProfiles Protein kinase domain profile. 621 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4076g00002 955 Pfam Leucine Rich Repeat 174 196 IPR001611 GO:0005515
Pral4076g00002 955 PANTHER RECEPTOR-LIKE PROTEIN 55 38 895 - -
Pral4076g00002 955 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Pral4076g00002 955 SUPERFAMILY Protein kinase-like (PK-like) 606 923 IPR011009 -
Pral4076g00002 955 Gene3D Ribonuclease Inhibitor 290 419 IPR032675 -
Pral4076g00002 955 CDD STKc_IRAK 627 893 - -
Pral4076g00002 955 Gene3D Phosphorylase Kinase; domain 1 582 696 - -
Pral4076g00002 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Pral4076g00002 955 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 697 906 - -
Pral4076g00002 955 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Pral4076g00002 955 SUPERFAMILY L domain-like 45 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4076g00002 Pral-Chr4076 9166 20402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4076g00002 1 902 Receptor kinase-like Gene Family AT5G01950 62.183 0.0 1127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pral4076g00002 Pkinase 5.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4076g00002 - - gmx:100815005 1364.36