Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4075g00026 ATGGATGATGCTGGGCATCGTGAAAATGGGAGGCACAAAGCTGATCAATATAAATCAGCTCAGGGACAGTGGTTGATGCAACATCAACCTTCGATGAAGCAAATTATGGCAATTATGGCCGAAAGAGATGCAGCCATTCAAGAGAGAAATCTAGCCCTTTCTGAAAAAAAGGCAGCCATGGCAGAGCGTGATATGGCATTCTTGCAACGAGATACTGCCATCGCAGAACGGAACAATGCCATTATGGAACGAGATAATGCAATTGCTACCCTTCAGTATCGAGAGAACTCCATAGCCAATGGTAGCATGTCTTCTTGTCCTCCAGGATGCCAAATAGCCCGAGGTGTCAAGCATGTGCATCATCCTCAGCAACAAGTACACCATTTACCTCATATGGGTGATACTTCTTACAGCACACGGGAAATACACACTGGTGATGACCTTCCAACAGCGTCCATGCCGAATGAAACAGGGAAATCACGGCGGGCCAAGCGACCAAAGGATGGTAAGTCAGTTTCACCTAGTAAGAAGGCACCAAGAGCTGCAAAAAAGGTCAAGAGGGAGGGTGAAGACTTAAATAAGATGATGTTTGGCAAGGGCCATGAGTGGAAGAGTGGTCAGGACATGGTTAATGGAGGTGATGATCTTAACAAGCAGTTAGGGTCATCGAAGGCAGATTGGAAAGGTCAAGACTTGGGGTTGAACCAGGTAGTGTATGATGAGTCAACAATGCCAGCACCTGTATGCTCTTGTACCAGTGTTCTGAGACAGTGCTACAAATGGGGTAATGGGGGTTGGCAGTCTGCTTGTTGCACAACAACTCTGTCAATGTATCCACTTCCCGCTGTACCCAACAAGAGGCATGCTAGGGTTGGTGGGCGAAAGATGAGTGGAGGCGCTTTCAATAAGCTGCTTAGCCGGCTTGCAGCAGAGGGACATGATCTGTCTAACCCAGTTGACCTGAAGGACCATTGGGCCAAACATGGCACAAACCGCTATATCACAATCAAGTAG 1014 0.4753 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAAMAERDMAFLQRDTAIAERNNAIMERDNAIATLQYRENSIANGSMSSCPPGCQIARGVKHVHHPQQQVHHLPHMGDTSYSTREIHTGDDLPTASMPNETGKSRRAKRPKDGKSVSPSKKAPRAAKKVKREGEDLNKMMFGKGHEWKSGQDMVNGGDDLNKQLGSSKADWKGQDLGLNQVVYDESTMPAPVCSCTSVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4075g00026 337 MobiDBLite consensus disorder prediction 1 21 - -
Pral4075g00026 337 MobiDBLite consensus disorder prediction 1 15 - -
Pral4075g00026 337 MobiDBLite consensus disorder prediction 129 157 - -
Pral4075g00026 337 MobiDBLite consensus disorder prediction 158 174 - -
Pral4075g00026 337 SMART GAGA_bind_2 1 337 IPR010409 -
Pral4075g00026 337 Coils Coil 51 78 - -
Pral4075g00026 337 PANTHER - 1 337 IPR010409 -
Pral4075g00026 337 MobiDBLite consensus disorder prediction 121 190 - -
Pral4075g00026 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4075g00026 Pral-Chr4075 196722 198877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4075g00026 65 337 BBR or BPC Transcription factor family AT5G42520 63.699 7.89e-120 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pral4075g00026 GAGA_bind 4.5e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4075g00026 - - gmx:100783502 590.497