Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4075g00003 ATGGGCAATTGTGGCACCAGAGAGGAATCGGCTGTTGTCTCCAATGCTCAAGTTCAGCAGCTGCACATGTCGTCCTTGACTGCTAAAAATGCTGCCAACGACAAGAAGCACAATCGGTCTGTGTCAGATCTGAGCGACATTTCTACTCCGCGCCACAACTTCGAGGATGTCAGGAAGAATACACTACTCTATACTCATGTCATTGCTTTTACATTGTATGAGCTCGAGACTATCACTAAGAGTTTTCGTTCCGATTATATCCTCGGAGAAGGGGGGTTCGGCACTGTCTATAAAGGTTACATCGACGAGAATGTGAGAGTTGGACTCAAATCCCTTCCTGTTGCTGTCAAGGTTCTAAACAAGGAGGGTCTTCAGGGACATCGCGAGTGGCTTACAGAAATCAATTTCCTGGGGCAGCTTAGGCATCCGAATTTGGTTAAGTTGATCGGATACTGCTGTGAGGACGACCACAGGCTACTTGTATACGAGTTCATGTTTCGAGGAAGTTTAGAGAATCATCTATTCCGAAAGGCAACTGTTCCTTTATCATGGGCTACAAGAATGATGATTGCCCTTGGAGCTGCTAAGGGGCTTGCTTTTCTTCATAATGCTGAAAGGCCAGTAATCTATCGAGACTTCAAAACATCTAATATATTATTGGACTCCGATTATACTGCCAAGCTTTCTGATTTTGGACTAGCAAAAGCTGGACCACAAGGTGATGAAACCCATGTGTCCACCAGGGTTATGGGCACCTATGGATATGCTGCCCCCGAATATGTAATGACTGGTCACCTGACTGCAAGGAGTGATGTGTATAGCTTTGGAGTTGTTCTTTTGGAACTTTTAACCGGAAGGAAATCCGTTGACAAAACAAGACCGGGTAGGGAACAGAGCTTGGTGGATTGGGCTAGACCAAAGCTTAATGACAAGAGAAAGCTCCTGCAGATAATTGATCCTAGACTGGAAAACCAATACTCAGTGAAGGCAGCACAGAAAGCATGTAGCTTGGCTTACTACTGTTTGAGTCAAAATCCCAAAGCCAGGCCATTAATGAGTGATGTAGTCGAGACATTGGAACCTTTACAAAGTTGTAGTGATGGTGCTGAAGTCTCGTCATTAGGATCAACTGCTGGAGGTGGTGGTCCCTTTGCCATGAGTGGAATCTCCGACTATCGAATGCGCCAGAGGTTTTCAAACAATGTCGGCCCTGGTGCTAGTTGTTGGTCTCCCAACCCAAACTGCTCACCAGGTGCCCCTGCAGCATGCAGGGTCAGATGA 1281 0.4621 MGNCGTREESAVVSNAQVQQLHMSSLTAKNAANDKKHNRSVSDLSDISTPRHNFEDVRKNTLLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEINFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGREQSLVDWARPKLNDKRKLLQIIDPRLENQYSVKAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSCSDGAEVSSLGSTAGGGGPFAMSGISDYRMRQRFSNNVGPGASCWSPNPNCSPGAPAACRVR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4075g00003 426 Pfam Protein tyrosine and serine/threonine kinase 87 359 IPR001245 GO:0004672|GO:0006468
Pral4075g00003 426 Gene3D Phosphorylase Kinase; domain 1 42 164 - -
Pral4075g00003 426 FunFam Serine/threonine-protein kinase BIK1 49 164 - -
Pral4075g00003 426 PANTHER OS01G0588500 PROTEIN-RELATED 40 363 - -
Pral4075g00003 426 CDD STKc_IRAK 88 362 - -
Pral4075g00003 426 Gene3D Transferase(Phosphotransferase) domain 1 165 373 - -
Pral4075g00003 426 FunFam Probable serine/threonine-protein kinase PBL8 165 377 - -
Pral4075g00003 426 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4075g00003 426 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Pral4075g00003 426 SUPERFAMILY Protein kinase-like (PK-like) 58 360 IPR011009 -
Pral4075g00003 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4075g00003 Pral-Chr4075 34030 40673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4075g00003 33 369 Glycoside Hydrolase AT3G07070 50.000 1.61e-109 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral4075g00003 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4075g00003 - - zju:107431216 765.763