Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4074g00012 ATGTCTGTTCAGCTCAGCAGGGAAGGATTAGTGTCTGCTTCTTCTTCATCTTCTTCATGGAACCACAGGCTCAACAACCATACGCACACCCCTTTCCCTCTTCACAAGACCAGCAAAATCGAAGAAAGCGATGAGGATCTGTTCAGAGTGCCGGACATGGAAGCCACGGCGGCCGGTGGCAGCGGAGAGCGTGGAGGAGGAGGAGGAGGGGCTGTTGTTTCAAATGGGAATGCGAGCTTAAGCAATGTGACAGTGACAGTGACAGAAGCTCAGCCTCAGAGTGGAAAACGAAGAAGAGGAAGAAACCCTGCAGATAAAGAGGGCAGACGCCTCAAGAGGCTGTTGAGGAATAGGGTATCAGCACAGCAGGCAAGAGAAAGGAAGAAGGTGTATGTGAATGAGTTGGAAGCGAAGGCTAAGGAGTTGCAAGACAAGAATTACAAGTTGGAAGAGCGTATCTCTACTGTGATCAATGAGAACACCATGCTTCGTAAGGTTCTTATGAACACAAGGCCTAAAGTTGATGAAAGCAGTGAACCAAAGCAGGATCAATTAAGTAAAAGTTAA 567 0.4797 MSVQLSREGLVSASSSSSSWNHRLNNHTHTPFPLHKTSKIEESDEDLFRVPDMEATAAGGSGERGGGGGGAVVSNGNASLSNVTVTVTEAQPQSGKRRRGRNPADKEGRRLKRLLRNRVSAQQARERKKVYVNELEAKAKELQDKNYKLEERISTVINENTMLRKVLMNTRPKVDESSEPKQDQLSKS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4074g00012 188 SUPERFAMILY Leucine zipper domain 109 168 IPR046347 GO:0003700|GO:0006355
Pral4074g00012 188 MobiDBLite consensus disorder prediction 34 51 - -
Pral4074g00012 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 107 170 IPR004827 GO:0003700|GO:0006355
Pral4074g00012 188 MobiDBLite consensus disorder prediction 94 110 - -
Pral4074g00012 188 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 112 127 IPR004827 GO:0003700|GO:0006355
Pral4074g00012 188 MobiDBLite consensus disorder prediction 169 188 - -
Pral4074g00012 188 Pfam bZIP transcription factor 106 165 IPR004827 GO:0003700|GO:0006355
Pral4074g00012 188 Coils Coil 121 159 - -
Pral4074g00012 188 Gene3D Single helix bin 128 169 - -
Pral4074g00012 188 MobiDBLite consensus disorder prediction 1 110 - -
Pral4074g00012 188 MobiDBLite consensus disorder prediction 74 93 - -
Pral4074g00012 188 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 14 184 IPR044280 GO:0000981|GO:0045944
Pral4074g00012 188 MobiDBLite consensus disorder prediction 1 33 - -
Pral4074g00012 188 CDD bZIP_HY5-like 119 160 - -
Pral4074g00012 188 SMART brlzneu 105 169 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4074g00012 Pral-Chr4074 76398 79713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4074g00012 66 177 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 58.929 1.17e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4074g00012 bZIP_1 1.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4074g00012 K16241 - gmx:778143 202.986