Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4073g00047 | ATGGATAGATTCACCAATGGTGTTGATGGTACTCAAATGGGAGAAATTCGAGACTCGAGCTTTCAGAGGCAAGCATGGAAGTCAGTTTATGATGAAGCTCACAAGTCAGATAGGCCTCTCAAAAGAATCTGTAGCCCTGAGCGTCAAATCCTATGCCATCCCTCTGTTTCTCTCACTCTGCCTCCACCTCCTTCATCGTCTTCTTCAAGTATCACGTTTCCCTTTGCCCTTGATGAGTCTCCCTACCAATCTACAGCCACAACTTATCAGCCCTTGAAGTCTTTCGCATGCCCACCGTTTTTAGGATCAGACCCAGAACGTGATCATCATCAGCGGCGGCAGACGCCTCTTCGGCCATTGCACACTACTAAGCTATACAGGGGAGTGAGGCAACGCCACTGGGGCAAATGGGTGGCTGAGATTCGTCTTCCTAACAGTAGAAATCGCCTCTGGTTAGGCACATTTGACACTGCAGAAGATGCTGCTTTGGCTTATGATCGTGAGGCCTTTAAGCTCAGAGGAGAGAATGCTAGGCTCAATTTCCCCGATCTCTTTCTCAATAAAGCTCCCCATTCAACTGCTTCTTCCTCCTCGTCCTCAAAGCAGCCTGAACCAGAAGAGAATCACGAGGTTCAGGAAACTGCTAGAGGTAATACAGCAGAGGGAGGTCTTTCAGAGGCAGAGAAAGTGGGTTTGGGAGACATGGAGGCTTGGTACAACACGATTCCACAAGGCTGGGGACCCGAGAGCGCTGTGTGGGATGATTTAGACAGCACCAACCATCTTCTGTTTCAGTCACAGTTTCCTTTTGTGAATCCAAACCAGCAAGACTTCGATGATGCTAATAATGCTGAGAGACAAGAAGACAAGACAGGACCAGATTATGCCTCCGCTTCCTCCTCTGCTTGTCTCATGAAACCTTTCTCCTGCAGGGATTAA | 939 | 0.4856 | MDRFTNGVDGTQMGEIRDSSFQRQAWKSVYDEAHKSDRPLKRICSPERQILCHPSVSLTLPPPPSSSSSSITFPFALDESPYQSTATTYQPLKSFACPPFLGSDPERDHHQRRQTPLRPLHTTKLYRGVRQRHWGKWVAEIRLPNSRNRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPDLFLNKAPHSTASSSSSSKQPEPEENHEVQETARGNTAEGGLSEAEKVGLGDMEAWYNTIPQGWGPESAVWDDLDSTNHLLFQSQFPFVNPNQQDFDDANNAERQEDKTGPDYASASSSACLMKPFSCRD | 312 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4073g00047 | 312 | MobiDBLite | consensus disorder prediction | 268 | 300 | - | - | |
Pral4073g00047 | 312 | ProSiteProfiles | AP2/ERF domain profile. | 125 | 182 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4073g00047 | 312 | SMART | rav1_2 | 125 | 188 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4073g00047 | 312 | SUPERFAMILY | DNA-binding domain | 125 | 183 | IPR016177 | GO:0003677 | |
Pral4073g00047 | 312 | Gene3D | AP2/ERF domain | 125 | 183 | IPR036955 | GO:0003700|GO:0006355 | |
Pral4073g00047 | 312 | Pfam | AP2 domain | 126 | 174 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4073g00047 | 312 | FunFam | Ethylene-responsive transcription factor 2 | 124 | 183 | - | - | |
Pral4073g00047 | 312 | MobiDBLite | consensus disorder prediction | 189 | 224 | - | - | |
Pral4073g00047 | 312 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 19 | 256 | - | - | |
Pral4073g00047 | 312 | CDD | AP2 | 124 | 184 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4073g00047 | 312 | PRINTS | Ethylene responsive element binding protein signature | 126 | 137 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4073g00047 | 312 | PRINTS | Ethylene responsive element binding protein signature | 148 | 164 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4073g00047 | Pral-Chr4073 | 274464 | 276007 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4073g00047 | 114 | 257 | AP2-EREBP Transcription Factor Family | AT4G28140 | 57.931 | 3.42e-48 | 161 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pral4073g00047 | AP2 | 5.1e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4073g00047 | - | - | pcin:129312494 | 377.096 |