Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4073g00039 ATGGGAGAAAATGCAATGGAAGAGAAAGATTTGATGCTACAAGGCCAAGCTGATATCTGGAAGTACATGTTCGGCTTCGCCGATTCCATGGCCCTCAAATCTGCCGTGCAGCTCCGCATACCCGATATTATACACCGCCACGGTGGACCGATCACTTTGTCCCAGATCACCGCCTCTCTTCCCGACGCATCCTGTCCCCACCCCACCTACCTCTACCGCATCATGAGGCTCCTCGTCCGCCGCAACATCTTCGCCGCCCACCACCCCTCCGACGGAGGAGACACGCTCTACGGCCTCACCCACTCTTCTCGGTGGCTGCTAAGTGACTCCGACCTTAACCTGGCACCCATGCTTCTCATGGAGAATCACCCCGACCTTATGGCTCCCTGGCACTGCTTCAGCGACTGCGTGAGAGAAGGCGGCGAGGCCTTCAAGAAGGCTCACGGCCGAGAGATTTGGGATTTGGCATCGGAGAGCCCAGAATTCAACAAGCTGTTCAACGAAGGGATGGCGTGCACGGCGAGGATCGTGACGAAGGCGATCGTCTCTGCGTATAAGGAAGGGTTCGAGAGCATTTCGTCGTTGGTGGATGTTGGGGGTGGCACCGGAGGGACTGTGTCGGAGATAGTGAAAGCGTATCCCCACATAAAGTGCATCAACTTCGATCTTCCTCATGTGGTTTCCACCGCGCCTGAACATGACGGAGTCACCCACGTCGGAGGAGACATGTTCCTCTCCGTGCCTAATGCAGATGCCGTTTTCATGAAGTGGATACTGCACGATTGGAGCGACGAAGATTGCATAAAGATACTGAAGAACTGCAAGAAATCGGTGCCAAAGGATAAAGGGAAGGTGATCATAGCAGAATTTGTTCTGAAGCCAGACGGGAAAGGGTTGTTCGATGACACAGGCTTGGTCTTTGATTTGCTTATGATTGCACACACGTCTGGGAGGGAGAGGACTGAGTTGGAATGGAAGAATCTACTGAATCAAGCAGGCTTCCCTCGCTATCAAGTCATCAACATACCTTCTTTCGTGTCCATCATCGAGGCTTATCCGGCTTAG 1065 0.5343 MGENAMEEKDLMLQGQADIWKYMFGFADSMALKSAVQLRIPDIIHRHGGPITLSQITASLPDASCPHPTYLYRIMRLLVRRNIFAAHHPSDGGDTLYGLTHSSRWLLSDSDLNLAPMLLMENHPDLMAPWHCFSDCVREGGEAFKKAHGREIWDLASESPEFNKLFNEGMACTARIVTKAIVSAYKEGFESISSLVDVGGGTGGTVSEIVKAYPHIKCINFDLPHVVSTAPEHDGVTHVGGDMFLSVPNADAVFMKWILHDWSDEDCIKILKNCKKSVPKDKGKVIIAEFVLKPDGKGLFDDTGLVFDLLMIAHTSGRERTELEWKNLLNQAGFPRYQVINIPSFVSIIEAYPA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4073g00039 354 FunFam O-methyltransferase family protein 108 352 - -
Pral4073g00039 354 SUPERFAMILY "Winged helix" DNA-binding domain 9 110 IPR036390 -
Pral4073g00039 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 353 IPR016461 GO:0008168
Pral4073g00039 354 Gene3D Vaccinia Virus protein VP39 108 354 IPR029063 -
Pral4073g00039 354 PANTHER O-METHYLTRANSFERASE 13 336 IPR016461 GO:0008168
Pral4073g00039 354 Pfam O-methyltransferase domain 130 334 IPR001077 GO:0008171
Pral4073g00039 354 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Pral4073g00039 354 Gene3D - 2 106 IPR036388 -
Pral4073g00039 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Pral4073g00039 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4073g00039 Pral-Chr4073 230101 231989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4073g00039 30 350 Monolignol Biosynthesis Gene Families AT5G54160 43.293 2.52e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4073g00039 K22588 - qsu:111998567 526.168