Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4073g00015 ATGACGATAGGCTCCATCTTCAGCAAAGCTGCCAGGACTTTCCATACCTACCCTTCTCCTTCTAAGCTTCTCCTCATCTGCACTCTCAGTGGTGGAGGTGTGGTGGCATACTCAGAATTACAATCTGATTCTGGACCTCCAAGAATTGAATCTAATGCCAAGGAAAAGAGGGTAGTGGTTCTTGGAACAGGATGGGCTGGTACCAGTTTCCTTAAGGATCTGGATGCTTCAATATATGATGTTCAGGTTGTCCCTCGCAACTACTTTGCATTCACTCCCTTATTACCCAGTGTCACTTGTGGGACAGTTGAAGCGAGGAGCATTGTGGAGCCAGTTCGAAACATCATAAAAAAGAGAAAAGGAGAAATTAAATTTTGGGAGGCAGAGTGTGTCAAGATTGATGCTGCAAACAAAAAGTTTTTTGTCGATCCAATATTGATGCCAACTAGCGGGAAGTGGGAATTTTCTCTGGAATATGACTTTTTGGTTGTAGCAGCTGGAGCACAAGCGAATACGTTTAATACCCCAGGTGTCAAGGAGAACTGTCATTTTTTAAAGGAGGTGGAGGATGCTCAAAGGATCAGAACGTCTGTGATAGATTGCTTTGAGAAGGCCATTCTTCCTAGTTTAACTGAGGAAGAGCGACGAACAAATCTTCATTTTGTAATTGTTGGGGGTGGTCCAACTGGTGTGGAATTTGCTGCTGAGCTTCATGATTATGTCCATGAAGATCTATCTAAATTATACCCAATGACTAAAGATATGGTGAAAATAACAATGATCCAATCGGGAGATCACATCTTGAACACGTTTGATGAAAGAATCAGTGCATTTGCTGAGCAGAAATTCAGGAGAGATGGTATAGAAGTTCAAACAGGACGCCGAGTTATCAATGTTACTGACAAGGAAATTAAAATGAAGATAAAATCTACTGGAGAGGTTTGCTCAATACCTCATGGATTGGTAGTCTGGTCCACTGGCATTGGGACTCTTCCAGTTGTGCGGGATTTCATGAAACAAATTAATCAGGCTAATAGAAAGGTCCTGCAGACTGATGAATGGTTACGTGTGATAGGATGTGAAGCTGTGTACGCTATTGGGGACTGTGCTTCAATACATCAACGTAAAATCATGGATGACATCTCAACCATATTCAAAGCTGCGGACAAGGACAACTCTGGCACCTTAACAATTAAAGAATTCAAGGATTTAATGGATGACATCATCTTGAGATATCCCCAAGTGGAACTGTATCTGAAGAGCAAGCATATGCTTGATGTGGCTGATCTGTGGAAAGATCCTCAGGGGAATGAGAGAGAAGCAATAGACATAGAAGGGTTTAAGTCAGCCCTTGGTCATGTGGATTCGCAGATGAAGAGTCTGCCAGCAACAGCACAGGTTGCTGCCCAACAAGGTGCATATCTAGCTGCCTGCTTTAACCGCATGGAGCAATGCACTGCGATTCCTGAAGGTCCAATGAGATTTAGAGAATCCGGACGCCATAAGTTTCGTCCCTTCAGGTACAAGCATTTTGGTCAATTTGCTCCTCTTGGCGGAGAGCAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCAATGGGTCACAGCACTCAATGGCTTTGGTACTCTGTATATGCGAGCAAGCAAGTGAGCTGGCGCACAAGGGTACTGGTGATATCTGATTGGACAAGAAGATTCATCTTTGGAAGAGATTCAAGTCGTATCTGA 1728 0.4363 MTIGSIFSKAARTFHTYPSPSKLLLICTLSGGGVVAYSELQSDSGPPRIESNEXKEKRVVVLGTGWAGTSFLKDLDASIYDVQVVXPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEIKFWEAECVKIDAANKKFFVDPILMPTXSGKWEFSLEYDFLVVAAGAQANTFNTPGVKENCHFLKEVEDAQRIRTSVIDCFEKAILPSLTEEERRTNLHFVIVGGGPTGVEFAAELHDYVHEDLSKLYPMTKDMVKITMIQSGDHILNTFDERISAFAEQKFRRDGIEVQTGRRVINVTDKEIKMKIKSTGEVCSIPHGLVVWSTGIGTLPVVRDFMKQINQANRKVLQTDEWLRVIGCEAVYAIGDCASIHQRKIMDDISTIFKAADKDNSGTLTIKEFKDLMDDIILRYPQVELYLKSKHMLDVADLWKDPQGNEREAIDIEGFKSALGHVDSQMKSLPATAQVAAQQGAYLAACFNRMEQCTAIPEGPMRFRESGRHKFRPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVISDWTRRFIFGRDSSRI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4073g00015 578 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
Pral4073g00015 578 ProSitePatterns EF-hand calcium-binding domain. 392 404 IPR018247 -
Pral4073g00015 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 57 379 IPR023753 GO:0016491
Pral4073g00015 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 223 241 - -
Pral4073g00015 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 162 180 - -
Pral4073g00015 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 59 78 - -
Pral4073g00015 578 Gene3D - 435 577 - -
Pral4073g00015 578 Gene3D - 47 400 - -
Pral4073g00015 578 SUPERFAMILY FAD/NAD(P)-binding domain 223 377 IPR036188 -
Pral4073g00015 578 SUPERFAMILY FAD/NAD(P)-binding domain 56 275 IPR036188 -
Pral4073g00015 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 48 408 - -
Pral4073g00015 578 PANTHER NADH DEHYDROGENASE 51 578 IPR045024 GO:0003954|GO:0006116
Pral4073g00015 578 SMART efh_1 383 411 IPR002048 GO:0005509
Pral4073g00015 578 SUPERFAMILY EF-hand 336 464 IPR011992 -
Pral4073g00015 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 425 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4073g00015 Pral-Chr4073 59732 65426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4073g00015 7 578 Chloroplast and Mitochondria Gene Families AT4G21490 64.931 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4073g00015 K03885 - twl:120000424 925.235