Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4073g00014 ATGCGTTGGTCTTCTTTCTACCAGACAGCCTCAAGGGCTTTTCATCAGTCTCCTTCCTGGTCCAAGGTTCTTGTCCTCTGCACTGTCAGTGGGGGAGGTTTAGTGGCATATGCTGATGCAGGAGCAGTTCAGAGTGAGAATGGTGGGGATAAATGCCGGAAGAAGAAGGTGGTGGTAGTGGGAACAGGATGGGCTGGGACCAGTTTTGTGAAGAACTTTAAAAGCTCTTCGTTTGATGTGGAAGTAGTTTCACCTCGTAACTATTTTGCATTTACACCTTTGCTTCCAAGTGTCACTATCGGCACTGTGGAATCAAGAAGCATTGTTGAACCTATTCGCAAAATCATCAACAAGAAGAACGTAAACATTCAATTCACACAAGCTGAATGCTATAAGATCGATGCCAAGAATCGAAAAGTGTACTGTCGTTCTACTGCTCAAGACAGCGAAAATGGCAAACAAGAGTTTTCCATTGATTATGACTACCTCGTTCTAGCCATGGGAGCCCGTTCTAACACTTTCAACACCCCAGGTGTTGAAGAGCATACTCACTTCTTGAAGGAAGTGGAAGATGCTCAGACAATCCGTCGGAAAGTGATTGAACTTTTCGAAAAGGCAAGCCTGCCATGTGTATCTGAAGAGGAGAAGAAGAAACTTCTGCATTTTGTGGTAGTTGGCGGTGGTCCGACTGGTGTAGAGTTTGCTGCAGAGCTTCATGATCATGTTCATCAGGATTTATACAAACTATATCCTTCTGCCAAAGACTACCTACAGATTACACTTTTGGAAGCAGGCGATCATATTCTAAACATGTTTGACAAGAGGATTACTGAGTTTGCTGAAGAAAAGTTCAAAAGAGATGGGATCGATGTGAAACTAGGTTCTATGGTTATAAAAGTGGCTGAGAACGAAATCAATACAAAAGAAAGAGGAACTGGTAAGGTTGCATCTATACCTTACGGAATGGTGGTTTGGTCAACTGGTATTGGTCCTCGTCCTGAAGTTGTTCAGTTTATGAAAGATATTGGTCAGGGTAATAGGCGAGCAATTAGCACTGATGAATGGTTAAGAGTGGAAGGAGTTGAAAACATCTATGCGCTGGGAGATTGTGCTACTGTAAATCAACGTAGAGTTATGGAAGATATAGCAGTGATATTTAGCAAGGCAGACAAGAACAACATTGGGAAATTAGATCTGGATCATTTTCAAGAGGTTGTAGGAGACATTATTGAGAGGTACCCACAAGTGGATATTTACCTAAAGAAGAAGCAAATGAGGAACATAGTGACACTACTGAAGAACTCTCAAGAAAACGGTACTCTAGTGGACATTGAAACATTCAAATCTTGTCTTTCCGAAGTAGACTCCCAAATGAATCTTCCTGCAACAGCTCAGGTAGCTGCTCAACAAGGTGAGTATCTTGCAGACTGTTTCAATCGAATGGAAGAGTGTGAGAAATATCCTGAAGGACCCCTGAGGTTTAGAGGAACAGGACGTCATCGTTTTCGTCCCTTCAGGTACAAGCATTTCGGGCAATTTGCTCCGTTAGGAGGAGAACAAGCAGCAGCTCAGCTTCCAGGAGACTGGGTTTCAATCGGACACAGCACCCAGTGGCTCTGGTATTCTGTATATGCAAGCAAACAAGTGAGCTGGCGTACCCGGTATTTAGTGGTGGCAGATTGGGGACGACGCGTCATATTCGGCAGGGACTCAAGTGGAATATAA 1725 0.4354 MRWSSFYQTASRAFHQSPSWSKVLVLCTVSGGGLVAYADAGAVQSENGGDKCRKKKVVVVGTGWAGTSFVKNFKSSSFDVEVVSPRNYFAFTPLLPSVTIGTVESRSIVEPIRKIINKKNVNIQFTQAECYKIDAKNRKVYCRSTAQDSENGKQEFSIDYDYLVLAMGARSNTFNTPGVEEHTHFLKEVEDAQTIRRKVIELFEKASLPCVSEEEKKKLLHFVVVGGGPTGVEFAAELHDHVHQDLYKLYPSAKDYLQITLLEAGDHILNMFDKRITEFAEEKFKRDGIDVKLGSMVIKVAENEINTKERGTGKVASIPYGMVVWSTGIGPRPEVVQFMKDIGQGNRRAISTDEWLRVEGVENIYALGDCATVNQRRVMEDIAVIFSKADKNNIGKLDLDHFQEVVGDIIERYPQVDIYLKKKQMRNIVTLLKNSQENGTLVDIETFKSCLSEVDSQMKXLPATAQVAAQQGEYLADCFNRMEECEKYPEGPLRFRGTGRHRFRPFRYKHFGQFAPLGGEQAAAQLPGDWVSIGHSTQWLWYSVYASKQVSWRTRYLVVADWGRRVIFGRDSSGI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4073g00014 575 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Pral4073g00014 575 PANTHER NADH DEHYDROGENASE 49 574 IPR045024 GO:0003954|GO:0006116
Pral4073g00014 575 Pfam Pyridine nucleotide-disulphide oxidoreductase 55 380 IPR023753 GO:0016491
Pral4073g00014 575 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 423 574 - -
Pral4073g00014 575 SUPERFAMILY EF-hand 331 461 IPR011992 -
Pral4073g00014 575 Gene3D - 47 406 - -
Pral4073g00014 575 Gene3D - 421 574 - -
Pral4073g00014 575 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 45 406 - -
Pral4073g00014 575 SUPERFAMILY FAD/NAD(P)-binding domain 221 375 IPR036188 -
Pral4073g00014 575 SUPERFAMILY FAD/NAD(P)-binding domain 54 273 IPR036188 -
Pral4073g00014 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 57 76 - -
Pral4073g00014 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Pral4073g00014 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 349 371 - -
Pral4073g00014 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4073g00014 Pral-Chr4073 55448 59063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4073g00014 1 575 Chloroplast and Mitochondria Gene Families AT4G21490 68.675 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4073g00014 K03885 - qsa:O6P43_028759 895.96